Strain Fitness in Escherichia coli BW25113 around b2840

Experiment: TP4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP4
2,977,048	-				-0.2
2,977,235	-	lysR	b2839	0.21	+0.5
2,977,253	+	lysR	b2839	0.22	-0.2
2,977,339	-	lysR	b2839	0.32	+0.7
2,977,339	-	lysR	b2839	0.32	+0.6
2,977,671	-	lysR	b2839	0.67	-1.8
2,977,719	+	lysR	b2839	0.72	-3.3
2,977,792	-	lysR	b2839	0.80	-1.0
2,977,830	+	lysR	b2839	0.84	+1.0
2,977,830	-	lysR	b2839	0.84	-0.4
2,977,838	+	lysR	b2839	0.85	-0.3
2,977,838	+	lysR	b2839	0.85	+0.3
2,977,888	+				-1.6
2,977,891	-				+1.3
2,977,891	-				-1.7
2,977,964	+				+0.7
2,978,047	-	ygeA	b2840	0.12	-0.6
2,978,150	-	ygeA	b2840	0.27	+0.1
2,978,283	-	ygeA	b2840	0.46	-1.5
2,978,375	+	ygeA	b2840	0.59	-1.0
2,978,407	+	ygeA	b2840	0.64	+1.8
2,978,407	+	ygeA	b2840	0.64	-1.8
2,978,412	-	ygeA	b2840	0.65	-1.0
2,978,412	-	ygeA	b2840	0.65	-0.8
2,978,442	+	ygeA	b2840	0.69	+0.5
2,978,442	+	ygeA	b2840	0.69	-1.7
2,978,530	+	ygeA	b2840	0.82	-3.2
2,978,535	+	ygeA	b2840	0.82	-1.5
2,978,538	-	ygeA	b2840	0.83	-0.9
2,978,554	+	ygeA	b2840	0.85	-2.3
2,978,562	-	ygeA	b2840	0.86	-0.5
2,978,672	-				+0.0
2,978,705	+				+0.4
2,978,778	-				+0.9
2,978,847	-				-0.9
2,978,893	+				-1.0
2,978,900	+				+0.9
2,978,910	+				+0.0
2,978,918	-				-2.5
2,978,953	+	araE	b2841	0.12	+1.5
2,978,953	+	araE	b2841	0.12	-0.7
2,978,988	+	araE	b2841	0.14	-2.9
2,978,988	+	araE	b2841	0.14	+1.5
2,979,068	-	araE	b2841	0.20	+0.7
2,979,068	-	araE	b2841	0.20	-1.6
2,979,070	-	araE	b2841	0.20	-0.5
2,979,123	-	araE	b2841	0.24	+0.1
2,979,251	-	araE	b2841	0.33	+0.3
2,979,260	-	araE	b2841	0.33	+0.4
2,979,260	-	araE	b2841	0.33	-2.3
2,979,287	+	araE	b2841	0.35	-0.2
2,979,375	+	araE	b2841	0.42	-0.1
2,979,375	+	araE	b2841	0.42	-0.6
2,979,375	+	araE	b2841	0.42	-1.3
2,979,478	+	araE	b2841	0.49	-2.6
2,979,478	+	araE	b2841	0.49	+0.9
2,979,568	+	araE	b2841	0.55	-0.6
2,979,582	+	araE	b2841	0.56	-0.2
2,979,622	+	araE	b2841	0.59	+0.5