Experiment: Control_TnI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt proV and proW overlap by 8 nucleotides proW and proX are separated by 57 nucleotides
b2677: proV - glycine betaine transporter subunit (NCBI), at 2,802,837 to 2,804,039
proV
b2678: proW - glycine betaine transporter subunit (NCBI), at 2,804,032 to 2,805,096
proW
b2679: proX - glycine betaine transporter subunit (NCBI), at 2,805,154 to 2,806,146
proX
Position (kb)
2804
2805
2806 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2803.044 kb on + strand, within proV at 2803.044 kb on + strand, within proV at 2803.045 kb on + strand, within proV at 2803.061 kb on - strand, within proV at 2803.061 kb on - strand, within proV at 2803.066 kb on + strand, within proV at 2803.075 kb on - strand, within proV at 2803.076 kb on - strand, within proV at 2803.088 kb on + strand, within proV at 2803.089 kb on + strand, within proV at 2803.092 kb on - strand, within proV at 2803.097 kb on - strand, within proV at 2803.097 kb on - strand, within proV at 2803.097 kb on - strand, within proV at 2803.110 kb on - strand, within proV at 2803.117 kb on + strand, within proV at 2803.131 kb on + strand, within proV at 2803.135 kb on + strand, within proV at 2803.136 kb on + strand, within proV at 2803.136 kb on + strand, within proV at 2803.169 kb on + strand, within proV at 2803.170 kb on + strand, within proV at 2803.177 kb on - strand, within proV at 2803.177 kb on - strand, within proV at 2803.177 kb on - strand, within proV at 2803.177 kb on - strand, within proV at 2803.178 kb on - strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.199 kb on - strand, within proV at 2803.199 kb on - strand, within proV at 2803.201 kb on - strand, within proV at 2803.203 kb on + strand, within proV at 2803.203 kb on + strand, within proV at 2803.203 kb on + strand, within proV at 2803.206 kb on + strand, within proV at 2803.206 kb on + strand, within proV at 2803.208 kb on + strand, within proV at 2803.211 kb on - strand, within proV at 2803.213 kb on + strand, within proV at 2803.213 kb on + strand, within proV at 2803.213 kb on + strand, within proV at 2803.221 kb on - strand, within proV at 2803.221 kb on - strand, within proV at 2803.223 kb on + strand, within proV at 2803.225 kb on + strand, within proV at 2803.225 kb on + strand, within proV at 2803.233 kb on - strand, within proV at 2803.233 kb on - strand, within proV at 2803.233 kb on - strand, within proV at 2803.272 kb on + strand, within proV at 2803.273 kb on + strand, within proV at 2803.273 kb on + strand, within proV at 2803.273 kb on + strand, within proV at 2803.273 kb on + strand, within proV at 2803.275 kb on + strand, within proV at 2803.281 kb on - strand, within proV at 2803.281 kb on - strand, within proV at 2803.283 kb on + strand, within proV at 2803.283 kb on + strand, within proV at 2803.283 kb on + strand, within proV at 2803.313 kb on + strand, within proV at 2803.318 kb on + strand, within proV at 2803.321 kb on - strand, within proV at 2803.328 kb on + strand, within proV at 2803.328 kb on + strand, within proV at 2803.331 kb on + strand, within proV at 2803.331 kb on + strand, within proV at 2803.331 kb on + strand, within proV at 2803.331 kb on + strand, within proV at 2803.331 kb on + strand, within proV at 2803.333 kb on + strand, within proV at 2803.336 kb on - strand, within proV at 2803.336 kb on - strand, within proV at 2803.336 kb on - strand, within proV at 2803.339 kb on - strand, within proV at 2803.339 kb on - strand, within proV at 2803.339 kb on - strand, within proV at 2803.339 kb on - strand, within proV at 2803.339 kb on - strand, within proV at 2803.343 kb on + strand, within proV at 2803.345 kb on + strand, within proV at 2803.347 kb on - strand, within proV at 2803.347 kb on - strand, within proV at 2803.348 kb on + strand, within proV at 2803.349 kb on - strand, within proV at 2803.349 kb on - strand, within proV at 2803.350 kb on + strand, within proV at 2803.350 kb on + strand, within proV at 2803.350 kb on + strand, within proV at 2803.350 kb on + strand, within proV at 2803.351 kb on + strand, within proV at 2803.351 kb on + strand, within proV at 2803.352 kb on + strand, within proV at 2803.356 kb on + strand, within proV at 2803.362 kb on + strand, within proV at 2803.362 kb on + strand, within proV at 2803.364 kb on - strand, within proV at 2803.366 kb on + strand, within proV at 2803.370 kb on - strand, within proV at 2803.442 kb on + strand, within proV at 2803.442 kb on + strand, within proV at 2803.473 kb on + strand, within proV at 2803.473 kb on + strand, within proV at 2803.496 kb on - strand, within proV at 2803.511 kb on + strand, within proV at 2803.515 kb on - strand, within proV at 2803.521 kb on + strand, within proV at 2803.521 kb on + strand, within proV at 2803.521 kb on + strand, within proV at 2803.523 kb on + strand, within proV at 2803.523 kb on + strand, within proV at 2803.523 kb on + strand, within proV at 2803.523 kb on + strand, within proV at 2803.528 kb on - strand, within proV at 2803.528 kb on - strand, within proV at 2803.528 kb on - strand, within proV at 2803.529 kb on - strand, within proV at 2803.531 kb on - strand, within proV at 2803.531 kb on - strand, within proV at 2803.531 kb on - strand, within proV at 2803.533 kb on - strand, within proV at 2803.533 kb on - strand, within proV at 2803.564 kb on + strand, within proV at 2803.564 kb on + strand, within proV at 2803.565 kb on + strand, within proV at 2803.565 kb on + strand, within proV at 2803.566 kb on + strand, within proV at 2803.566 kb on + strand, within proV at 2803.566 kb on + strand, within proV at 2803.566 kb on + strand, within proV at 2803.566 kb on + strand, within proV at 2803.566 kb on + strand, within proV at 2803.569 kb on - strand, within proV at 2803.569 kb on - strand, within proV at 2803.571 kb on - strand, within proV at 2803.572 kb on - strand, within proV at 2803.573 kb on - strand, within proV at 2803.574 kb on - strand, within proV at 2803.574 kb on - strand, within proV at 2803.579 kb on - strand, within proV at 2803.579 kb on - strand, within proV at 2803.618 kb on + strand, within proV at 2803.623 kb on + strand, within proV at 2803.636 kb on + strand, within proV at 2803.646 kb on - strand, within proV at 2803.649 kb on - strand, within proV at 2803.649 kb on - strand, within proV at 2803.650 kb on - strand, within proV at 2803.660 kb on - strand, within proV at 2803.663 kb on - strand, within proV at 2803.667 kb on + strand, within proV at 2803.675 kb on - strand, within proV at 2803.684 kb on - strand, within proV at 2803.686 kb on - strand, within proV at 2803.705 kb on - strand, within proV at 2803.706 kb on - strand, within proV at 2803.710 kb on + strand, within proV at 2803.728 kb on - strand, within proV at 2803.734 kb on - strand, within proV at 2803.773 kb on + strand, within proV at 2803.809 kb on - strand, within proV at 2803.814 kb on - strand, within proV at 2803.855 kb on + strand, within proV at 2803.855 kb on + strand, within proV at 2803.857 kb on - strand, within proV at 2803.857 kb on - strand, within proV at 2803.872 kb on - strand, within proV at 2803.876 kb on + strand, within proV at 2803.877 kb on + strand, within proV at 2803.933 kb on - strand at 2803.970 kb on - strand at 2803.976 kb on - strand at 2803.978 kb on - strand at 2804.086 kb on - strand at 2804.086 kb on - strand at 2804.086 kb on - strand at 2804.102 kb on + strand at 2804.189 kb on + strand, within proW at 2804.228 kb on - strand, within proW at 2804.228 kb on - strand, within proW at 2804.239 kb on + strand, within proW at 2804.242 kb on + strand, within proW at 2804.242 kb on + strand, within proW at 2804.285 kb on - strand, within proW at 2804.285 kb on - strand, within proW at 2804.350 kb on - strand, within proW at 2804.458 kb on - strand, within proW at 2804.471 kb on - strand, within proW at 2804.471 kb on - strand, within proW at 2804.482 kb on - strand, within proW at 2804.482 kb on - strand, within proW at 2804.484 kb on + strand, within proW at 2804.586 kb on - strand, within proW at 2804.656 kb on - strand, within proW at 2804.778 kb on + strand, within proW at 2804.778 kb on + strand, within proW at 2804.794 kb on + strand, within proW at 2804.843 kb on + strand, within proW at 2804.866 kb on - strand, within proW at 2804.910 kb on - strand, within proW at 2805.096 kb on + strand at 2805.179 kb on - strand at 2805.368 kb on - strand, within proX at 2805.477 kb on + strand, within proX at 2805.689 kb on - strand, within proX at 2805.713 kb on + strand, within proX at 2805.721 kb on - strand, within proX at 2805.751 kb on - strand, within proX at 2805.891 kb on - strand, within proX at 2805.891 kb on - strand, within proX at 2805.922 kb on + strand, within proX at 2806.078 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_TnI remove 2,803,044 + proV b2677 0.17 -1.0 2,803,044 + proV b2677 0.17 -1.0 2,803,045 + proV b2677 0.17 -1.6 2,803,061 - proV b2677 0.19 -0.6 2,803,061 - proV b2677 0.19 -0.0 2,803,066 + proV b2677 0.19 +0.3 2,803,075 - proV b2677 0.20 +1.0 2,803,076 - proV b2677 0.20 -0.6 2,803,088 + proV b2677 0.21 -1.0 2,803,089 + proV b2677 0.21 -0.0 2,803,092 - proV b2677 0.21 -0.2 2,803,097 - proV b2677 0.22 +0.1 2,803,097 - proV b2677 0.22 -0.0 2,803,097 - proV b2677 0.22 +1.0 2,803,110 - proV b2677 0.23 -1.0 2,803,117 + proV b2677 0.23 -1.0 2,803,131 + proV b2677 0.24 +1.0 2,803,135 + proV b2677 0.25 +0.1 2,803,136 + proV b2677 0.25 +0.2 2,803,136 + proV b2677 0.25 -1.2 2,803,169 + proV b2677 0.28 -0.0 2,803,170 + proV b2677 0.28 -0.8 2,803,177 - proV b2677 0.28 +1.0 2,803,177 - proV b2677 0.28 +1.0 2,803,177 - proV b2677 0.28 -0.0 2,803,177 - proV b2677 0.28 +0.4 2,803,178 - proV b2677 0.28 -0.3 2,803,193 + proV b2677 0.30 +1.0 2,803,193 + proV b2677 0.30 +1.0 2,803,193 + proV b2677 0.30 +0.4 2,803,193 + proV b2677 0.30 -0.6 2,803,193 + proV b2677 0.30 -0.8 2,803,193 + proV b2677 0.30 +0.6 2,803,193 + proV b2677 0.30 -0.0 2,803,193 + proV b2677 0.30 +1.0 2,803,199 - proV b2677 0.30 +0.3 2,803,199 - proV b2677 0.30 +0.2 2,803,201 - proV b2677 0.30 -1.0 2,803,203 + proV b2677 0.30 -1.3 2,803,203 + proV b2677 0.30 +0.1 2,803,203 + proV b2677 0.30 -0.5 2,803,206 + proV b2677 0.31 -0.5 2,803,206 + proV b2677 0.31 -0.7 2,803,208 + proV b2677 0.31 +0.3 2,803,211 - proV b2677 0.31 +0.4 2,803,213 + proV b2677 0.31 -0.6 2,803,213 + proV b2677 0.31 +1.0 2,803,213 + proV b2677 0.31 -0.6 2,803,221 - proV b2677 0.32 -0.2 2,803,221 - proV b2677 0.32 +1.0 2,803,223 + proV b2677 0.32 +0.4 2,803,225 + proV b2677 0.32 +1.0 2,803,225 + proV b2677 0.32 +0.4 2,803,233 - proV b2677 0.33 +1.0 2,803,233 - proV b2677 0.33 -0.3 2,803,233 - proV b2677 0.33 -0.0 2,803,272 + proV b2677 0.36 -0.6 2,803,273 + proV b2677 0.36 +1.0 2,803,273 + proV b2677 0.36 -0.0 2,803,273 + proV b2677 0.36 +0.6 2,803,273 + proV b2677 0.36 +1.0 2,803,275 + proV b2677 0.36 +0.4 2,803,281 - proV b2677 0.37 +3.8 2,803,281 - proV b2677 0.37 +0.7 2,803,283 + proV b2677 0.37 -0.4 2,803,283 + proV b2677 0.37 -0.0 2,803,283 + proV b2677 0.37 -1.6 2,803,313 + proV b2677 0.40 -0.6 2,803,318 + proV b2677 0.40 -0.3 2,803,321 - proV b2677 0.40 +1.0 2,803,328 + proV b2677 0.41 -1.3 2,803,328 + proV b2677 0.41 -0.0 2,803,331 + proV b2677 0.41 +0.8 2,803,331 + proV b2677 0.41 -2.5 2,803,331 + proV b2677 0.41 -0.6 2,803,331 + proV b2677 0.41 -0.2 2,803,331 + proV b2677 0.41 -1.1 2,803,333 + proV b2677 0.41 -1.4 2,803,336 - proV b2677 0.41 -1.0 2,803,336 - proV b2677 0.41 +0.2 2,803,336 - proV b2677 0.41 -0.3 2,803,339 - proV b2677 0.42 +1.0 2,803,339 - proV b2677 0.42 -0.0 2,803,339 - proV b2677 0.42 +0.4 2,803,339 - proV b2677 0.42 +1.0 2,803,339 - proV b2677 0.42 +1.6 2,803,343 + proV b2677 0.42 -0.7 2,803,345 + proV b2677 0.42 -0.8 2,803,347 - proV b2677 0.42 +2.0 2,803,347 - proV b2677 0.42 -0.0 2,803,348 + proV b2677 0.42 -0.2 2,803,349 - proV b2677 0.43 -0.0 2,803,349 - proV b2677 0.43 +2.0 2,803,350 + proV b2677 0.43 +1.7 2,803,350 + proV b2677 0.43 -0.2 2,803,350 + proV b2677 0.43 -0.1 2,803,350 + proV b2677 0.43 +0.5 2,803,351 + proV b2677 0.43 -0.8 2,803,351 + proV b2677 0.43 -0.4 2,803,352 + proV b2677 0.43 -0.2 2,803,356 + proV b2677 0.43 -0.6 2,803,362 + proV b2677 0.44 -0.3 2,803,362 + proV b2677 0.44 +1.6 2,803,364 - proV b2677 0.44 +1.0 2,803,366 + proV b2677 0.44 +0.7 2,803,370 - proV b2677 0.44 +1.0 2,803,442 + proV b2677 0.50 -0.0 2,803,442 + proV b2677 0.50 -0.0 2,803,473 + proV b2677 0.53 -0.6 2,803,473 + proV b2677 0.53 +0.2 2,803,496 - proV b2677 0.55 +3.6 2,803,511 + proV b2677 0.56 -0.0 2,803,515 - proV b2677 0.56 -0.2 2,803,521 + proV b2677 0.57 -1.3 2,803,521 + proV b2677 0.57 +1.0 2,803,521 + proV b2677 0.57 +1.0 2,803,523 + proV b2677 0.57 -1.0 2,803,523 + proV b2677 0.57 -1.6 2,803,523 + proV b2677 0.57 +1.0 2,803,523 + proV b2677 0.57 +1.0 2,803,528 - proV b2677 0.57 -0.4 2,803,528 - proV b2677 0.57 -0.2 2,803,528 - proV b2677 0.57 -0.6 2,803,529 - proV b2677 0.58 -1.0 2,803,531 - proV b2677 0.58 +0.6 2,803,531 - proV b2677 0.58 +1.2 2,803,531 - proV b2677 0.58 -0.6 2,803,533 - proV b2677 0.58 +1.7 2,803,533 - proV b2677 0.58 +0.7 2,803,564 + proV b2677 0.60 +1.0 2,803,564 + proV b2677 0.60 -0.0 2,803,565 + proV b2677 0.61 +2.0 2,803,565 + proV b2677 0.61 +1.0 2,803,566 + proV b2677 0.61 +1.6 2,803,566 + proV b2677 0.61 +2.0 2,803,566 + proV b2677 0.61 -0.8 2,803,566 + proV b2677 0.61 -0.6 2,803,566 + proV b2677 0.61 +0.2 2,803,566 + proV b2677 0.61 -0.6 2,803,569 - proV b2677 0.61 +0.1 2,803,569 - proV b2677 0.61 +0.3 2,803,571 - proV b2677 0.61 +0.8 2,803,572 - proV b2677 0.61 -1.2 2,803,573 - proV b2677 0.61 -1.3 2,803,574 - proV b2677 0.61 -0.2 2,803,574 - proV b2677 0.61 -1.1 2,803,579 - proV b2677 0.62 +1.3 2,803,579 - proV b2677 0.62 +0.1 2,803,618 + proV b2677 0.65 -1.0 2,803,623 + proV b2677 0.65 -2.2 2,803,636 + proV b2677 0.66 -0.2 2,803,646 - proV b2677 0.67 -0.6 2,803,649 - proV b2677 0.67 -0.0 2,803,649 - proV b2677 0.67 +0.5 2,803,650 - proV b2677 0.68 -0.6 2,803,660 - proV b2677 0.68 -0.2 2,803,663 - proV b2677 0.69 -0.1 2,803,667 + proV b2677 0.69 +0.4 2,803,675 - proV b2677 0.70 -0.0 2,803,684 - proV b2677 0.70 -0.5 2,803,686 - proV b2677 0.71 +0.8 2,803,705 - proV b2677 0.72 -0.6 2,803,706 - proV b2677 0.72 +0.2 2,803,710 + proV b2677 0.73 +0.4 2,803,728 - proV b2677 0.74 +1.4 2,803,734 - proV b2677 0.75 +0.1 2,803,773 + proV b2677 0.78 -0.6 2,803,809 - proV b2677 0.81 -1.6 2,803,814 - proV b2677 0.81 +0.5 2,803,855 + proV b2677 0.85 -0.3 2,803,855 + proV b2677 0.85 -0.2 2,803,857 - proV b2677 0.85 -0.6 2,803,857 - proV b2677 0.85 -0.2 2,803,872 - proV b2677 0.86 -0.1 2,803,876 + proV b2677 0.86 -0.3 2,803,877 + proV b2677 0.86 -1.0 2,803,933 - +0.2 2,803,970 - +0.2 2,803,976 - -0.7 2,803,978 - +1.4 2,804,086 - +0.7 2,804,086 - -0.2 2,804,086 - +0.5 2,804,102 + -0.1 2,804,189 + proW b2678 0.15 -1.0 2,804,228 - proW b2678 0.18 -1.8 2,804,228 - proW b2678 0.18 -1.4 2,804,239 + proW b2678 0.19 +0.4 2,804,242 + proW b2678 0.20 +3.3 2,804,242 + proW b2678 0.20 -1.1 2,804,285 - proW b2678 0.24 +1.0 2,804,285 - proW b2678 0.24 -0.4 2,804,350 - proW b2678 0.30 -1.5 2,804,458 - proW b2678 0.40 +0.1 2,804,471 - proW b2678 0.41 -0.7 2,804,471 - proW b2678 0.41 -1.7 2,804,482 - proW b2678 0.42 -0.4 2,804,482 - proW b2678 0.42 +0.3 2,804,484 + proW b2678 0.42 -0.7 2,804,586 - proW b2678 0.52 +0.1 2,804,656 - proW b2678 0.59 -0.8 2,804,778 + proW b2678 0.70 -1.3 2,804,778 + proW b2678 0.70 -0.8 2,804,794 + proW b2678 0.72 -0.2 2,804,843 + proW b2678 0.76 -0.5 2,804,866 - proW b2678 0.78 -1.2 2,804,910 - proW b2678 0.82 +1.4 2,805,096 + +0.1 2,805,179 - -0.4 2,805,368 - proX b2679 0.22 +0.2 2,805,477 + proX b2679 0.33 -0.5 2,805,689 - proX b2679 0.54 +0.6 2,805,713 + proX b2679 0.56 -1.4 2,805,721 - proX b2679 0.57 -0.2 2,805,751 - proX b2679 0.60 +0.2 2,805,891 - proX b2679 0.74 +0.8 2,805,891 - proX b2679 0.74 -0.8 2,805,922 + proX b2679 0.77 -1.9 2,806,078 + -0.0
Or see this region's nucleotide sequence