Strain Fitness in Escherichia coli BW25113 around b4364
Experiment: Ste41
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ste41 |
---|---|---|---|---|---|
remove | |||||
4,599,536 | + | +0.1 | |||
4,599,561 | - | -0.8 | |||
4,599,589 | + | +1.0 | |||
4,599,593 | + | -2.7 | |||
4,599,609 | - | -2.2 | |||
4,599,609 | - | +1.4 | |||
4,599,609 | - | +0.5 | |||
4,599,619 | + | +1.7 | |||
4,599,681 | - | +1.5 | |||
4,599,761 | - | yjjB | b4363 | 0.24 | +0.0 |
4,599,761 | - | yjjB | b4363 | 0.24 | -1.3 |
4,599,831 | + | yjjB | b4363 | 0.39 | -0.3 |
4,599,837 | - | yjjB | b4363 | 0.40 | -3.0 |
4,599,873 | + | yjjB | b4363 | 0.48 | +1.5 |
4,599,873 | + | yjjB | b4363 | 0.48 | -2.0 |
4,599,874 | + | yjjB | b4363 | 0.48 | +0.7 |
4,599,874 | + | yjjB | b4363 | 0.48 | -0.1 |
4,599,941 | + | yjjB | b4363 | 0.62 | +1.7 |
4,600,053 | - | yjjB | b4363 | 0.86 | -1.7 |
4,600,138 | - | +0.9 | |||
4,600,198 | + | yjjP | b4364 | 0.11 | +0.8 |
4,600,208 | - | yjjP | b4364 | 0.13 | +2.3 |
4,600,211 | + | yjjP | b4364 | 0.13 | +0.9 |
4,600,219 | - | yjjP | b4364 | 0.14 | +1.7 |
4,600,219 | - | yjjP | b4364 | 0.14 | +2.0 |
4,600,273 | + | yjjP | b4364 | 0.21 | +1.0 |
4,600,273 | + | yjjP | b4364 | 0.21 | +2.2 |
4,600,455 | + | yjjP | b4364 | 0.45 | -0.3 |
4,600,485 | - | yjjP | b4364 | 0.49 | +1.8 |
4,600,485 | - | yjjP | b4364 | 0.49 | +0.5 |
4,600,538 | + | yjjP | b4364 | 0.55 | -1.5 |
4,600,538 | + | yjjP | b4364 | 0.55 | -0.8 |
4,600,588 | + | yjjP | b4364 | 0.62 | +1.7 |
4,600,595 | + | yjjP | b4364 | 0.63 | +0.9 |
4,600,613 | + | yjjP | b4364 | 0.65 | +1.7 |
4,600,621 | + | yjjP | b4364 | 0.66 | -0.2 |
4,600,629 | - | yjjP | b4364 | 0.67 | -2.4 |
4,600,629 | - | yjjP | b4364 | 0.67 | +1.1 |
4,600,629 | - | yjjP | b4364 | 0.67 | -0.3 |
4,600,680 | + | yjjP | b4364 | 0.74 | -1.3 |
4,600,694 | - | yjjP | b4364 | 0.76 | +2.4 |
4,600,716 | + | yjjP | b4364 | 0.78 | -1.7 |
4,600,730 | - | yjjP | b4364 | 0.80 | +0.7 |
4,600,750 | + | yjjP | b4364 | 0.83 | +2.3 |
4,600,750 | + | yjjP | b4364 | 0.83 | -1.3 |
4,600,756 | - | yjjP | b4364 | 0.84 | -1.3 |
4,600,757 | + | yjjP | b4364 | 0.84 | +1.0 |
4,600,757 | - | yjjP | b4364 | 0.84 | -1.8 |
4,600,758 | - | yjjP | b4364 | 0.84 | -3.1 |
4,600,781 | - | yjjP | b4364 | 0.87 | +1.1 |
4,600,781 | - | yjjP | b4364 | 0.87 | -4.1 |
4,600,785 | + | yjjP | b4364 | 0.87 | +0.8 |
4,600,804 | + | yjjP | b4364 | 0.90 | +1.3 |
4,600,841 | + | +1.1 | |||
4,600,843 | + | +1.0 | |||
4,600,853 | - | -1.5 | |||
4,600,853 | - | -0.8 | |||
4,600,859 | + | +0.5 | |||
4,600,859 | + | +3.4 | |||
4,600,867 | - | -1.7 | |||
4,600,874 | + | -2.3 | |||
4,600,874 | + | -1.3 | |||
4,600,876 | - | -1.1 | |||
4,600,878 | + | -1.2 | |||
4,600,882 | + | -2.7 | |||
4,600,882 | - | -0.1 | |||
4,600,888 | + | -1.7 | |||
4,600,888 | + | +1.0 | |||
4,600,890 | + | -1.2 | |||
4,600,894 | + | +0.9 | |||
4,600,894 | + | +1.4 | |||
4,600,895 | + | +0.5 | |||
4,600,895 | + | -2.2 | |||
4,600,902 | - | +2.5 | |||
4,600,902 | - | +1.5 | |||
4,600,902 | - | -0.5 | |||
4,600,928 | - | +1.5 | |||
4,600,943 | - | +1.5 | |||
4,600,951 | + | -0.5 | |||
4,600,956 | + | +1.8 | |||
4,600,956 | + | -0.5 | |||
4,600,968 | + | -2.6 | |||
4,600,988 | + | -2.0 | |||
4,601,002 | + | -0.8 | |||
4,601,002 | + | +1.0 | |||
4,601,006 | + | +4.7 | |||
4,601,006 | + | +1.5 | |||
4,601,049 | + | -0.8 | |||
4,601,049 | + | +1.5 | |||
4,601,053 | + | -0.1 | |||
4,601,053 | + | -2.5 | |||
4,601,063 | + | +1.5 | |||
4,601,349 | + | +1.5 | |||
4,601,371 | + | +1.5 | |||
4,601,538 | - | +2.2 | |||
4,601,556 | - | +1.5 | |||
4,601,569 | - | +1.5 | |||
4,601,574 | + | yjjQ | b4365 | 0.10 | +1.5 |
4,601,574 | + | yjjQ | b4365 | 0.10 | +1.5 |
4,601,625 | - | yjjQ | b4365 | 0.17 | +1.5 |
4,601,626 | - | yjjQ | b4365 | 0.17 | +1.5 |
4,601,626 | - | yjjQ | b4365 | 0.17 | +0.5 |
4,601,634 | - | yjjQ | b4365 | 0.18 | +1.5 |
4,601,634 | - | yjjQ | b4365 | 0.18 | +1.5 |
4,601,635 | - | yjjQ | b4365 | 0.19 | +1.5 |
4,601,694 | - | yjjQ | b4365 | 0.27 | -0.8 |
4,601,702 | - | yjjQ | b4365 | 0.28 | +0.5 |
4,601,702 | - | yjjQ | b4365 | 0.28 | +1.5 |
4,601,772 | - | yjjQ | b4365 | 0.37 | +1.2 |
4,601,772 | - | yjjQ | b4365 | 0.37 | +1.5 |
4,601,772 | - | yjjQ | b4365 | 0.37 | +0.2 |
4,601,772 | - | yjjQ | b4365 | 0.37 | -1.3 |
4,601,774 | - | yjjQ | b4365 | 0.38 | +4.3 |
4,601,778 | - | yjjQ | b4365 | 0.38 | -0.5 |
4,601,778 | - | yjjQ | b4365 | 0.38 | -0.8 |
4,601,780 | - | yjjQ | b4365 | 0.39 | +1.8 |
4,601,780 | - | yjjQ | b4365 | 0.39 | -0.5 |
4,601,780 | - | yjjQ | b4365 | 0.39 | -2.0 |
4,601,782 | - | yjjQ | b4365 | 0.39 | -0.7 |
4,601,783 | - | yjjQ | b4365 | 0.39 | -1.8 |
4,601,783 | - | yjjQ | b4365 | 0.39 | -2.2 |
4,601,784 | - | yjjQ | b4365 | 0.39 | -0.8 |
4,601,784 | - | yjjQ | b4365 | 0.39 | -0.8 |
4,601,786 | + | yjjQ | b4365 | 0.39 | +1.5 |
4,601,789 | + | yjjQ | b4365 | 0.40 | +1.5 |
4,601,789 | - | yjjQ | b4365 | 0.40 | -0.5 |
4,601,792 | - | yjjQ | b4365 | 0.40 | -1.1 |
4,601,794 | - | yjjQ | b4365 | 0.40 | -0.1 |
4,601,794 | - | yjjQ | b4365 | 0.40 | +3.3 |
4,601,795 | - | yjjQ | b4365 | 0.41 | +0.7 |
4,601,795 | - | yjjQ | b4365 | 0.41 | +5.8 |
4,601,797 | - | yjjQ | b4365 | 0.41 | -1.3 |
4,601,797 | - | yjjQ | b4365 | 0.41 | +2.1 |
4,601,802 | - | yjjQ | b4365 | 0.42 | +0.5 |
4,601,816 | - | yjjQ | b4365 | 0.44 | -1.1 |
4,601,816 | - | yjjQ | b4365 | 0.44 | -3.0 |
4,601,816 | - | yjjQ | b4365 | 0.44 | -2.7 |
4,601,816 | - | yjjQ | b4365 | 0.44 | +1.1 |
4,601,828 | - | yjjQ | b4365 | 0.45 | +0.3 |
4,601,828 | - | yjjQ | b4365 | 0.45 | +0.5 |
4,601,828 | - | yjjQ | b4365 | 0.45 | +2.0 |
4,601,839 | - | yjjQ | b4365 | 0.47 | -0.5 |
4,601,861 | - | yjjQ | b4365 | 0.50 | -2.2 |
4,601,861 | - | yjjQ | b4365 | 0.50 | -0.1 |
4,601,880 | - | yjjQ | b4365 | 0.52 | -0.1 |
Or see this region's nucleotide sequence