Strain Fitness in Escherichia coli BW25113 around b3408

Experiment: Ste41

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyhgF and feoA are separated by 456 nucleotidesfeoA and feoB are separated by 16 nucleotides b3407: yhgF - orf, hypothetical protein (VIMSS), at 3,535,407 to 3,537,728 yhgF b3408: feoA - ferrous iron transport protein A (NCBI), at 3,538,185 to 3,538,412 feoA b3409: feoB - ferrous iron transport protein B (NCBI), at 3,538,429 to 3,540,750 feoB Position (kb) 3538 3539Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 3537.187 kb on + strand, within yhgFat 3537.187 kb on + strand, within yhgFat 3537.187 kb on - strand, within yhgFat 3537.187 kb on - strand, within yhgFat 3537.188 kb on - strand, within yhgFat 3537.202 kb on + strand, within yhgFat 3537.202 kb on + strand, within yhgFat 3537.225 kb on + strand, within yhgFat 3537.260 kb on + strand, within yhgFat 3537.260 kb on + strand, within yhgFat 3537.268 kb on - strand, within yhgFat 3537.346 kb on + strand, within yhgFat 3537.346 kb on + strand, within yhgFat 3537.423 kb on + strand, within yhgFat 3537.423 kb on + strand, within yhgFat 3537.423 kb on + strand, within yhgFat 3537.431 kb on - strand, within yhgFat 3537.446 kb on - strand, within yhgFat 3537.482 kb on - strand, within yhgFat 3537.560 kb on - strandat 3537.566 kb on - strandat 3537.655 kb on + strandat 3537.663 kb on - strandat 3537.663 kb on - strandat 3537.663 kb on - strandat 3537.693 kb on + strandat 3537.695 kb on - strandat 3537.730 kb on + strandat 3537.735 kb on + strandat 3537.738 kb on - strandat 3537.740 kb on + strandat 3537.740 kb on + strandat 3537.763 kb on + strandat 3537.766 kb on + strandat 3537.774 kb on - strandat 3537.776 kb on + strandat 3537.784 kb on + strandat 3537.784 kb on - strandat 3537.784 kb on - strandat 3537.784 kb on - strandat 3537.784 kb on - strandat 3537.785 kb on + strandat 3537.785 kb on + strandat 3537.796 kb on + strandat 3537.810 kb on + strandat 3537.816 kb on - strandat 3537.819 kb on + strandat 3537.819 kb on + strandat 3537.819 kb on + strandat 3537.827 kb on - strandat 3537.827 kb on - strandat 3537.868 kb on - strandat 3537.868 kb on - strandat 3537.868 kb on - strandat 3537.868 kb on - strandat 3537.934 kb on + strandat 3537.943 kb on - strandat 3537.943 kb on - strandat 3537.964 kb on - strandat 3537.964 kb on - strandat 3537.987 kb on - strandat 3537.987 kb on - strandat 3537.987 kb on - strandat 3537.990 kb on + strandat 3538.000 kb on + strandat 3538.000 kb on + strandat 3538.034 kb on + strandat 3538.036 kb on + strandat 3538.036 kb on + strandat 3538.042 kb on - strandat 3538.044 kb on - strandat 3538.044 kb on - strandat 3538.080 kb on + strandat 3538.080 kb on + strandat 3538.111 kb on + strandat 3538.119 kb on - strandat 3538.123 kb on + strandat 3538.140 kb on + strandat 3538.140 kb on + strandat 3538.142 kb on + strandat 3538.142 kb on + strandat 3538.150 kb on + strandat 3538.155 kb on - strandat 3538.163 kb on + strandat 3538.172 kb on + strandat 3538.172 kb on + strandat 3538.172 kb on - strandat 3538.185 kb on + strandat 3538.185 kb on + strandat 3538.193 kb on - strandat 3538.193 kb on - strandat 3538.193 kb on - strandat 3538.195 kb on + strandat 3538.204 kb on - strandat 3538.204 kb on - strandat 3538.219 kb on - strand, within feoAat 3538.240 kb on + strand, within feoAat 3538.240 kb on + strand, within feoAat 3538.267 kb on + strand, within feoAat 3538.273 kb on + strand, within feoAat 3538.273 kb on + strand, within feoAat 3538.275 kb on - strand, within feoAat 3538.275 kb on - strand, within feoAat 3538.277 kb on + strand, within feoAat 3538.277 kb on + strand, within feoAat 3538.279 kb on + strand, within feoAat 3538.291 kb on + strand, within feoAat 3538.297 kb on + strand, within feoAat 3538.299 kb on + strand, within feoAat 3538.299 kb on - strand, within feoAat 3538.301 kb on + strand, within feoAat 3538.301 kb on + strand, within feoAat 3538.301 kb on + strand, within feoAat 3538.306 kb on + strand, within feoAat 3538.307 kb on - strand, within feoAat 3538.309 kb on + strand, within feoAat 3538.311 kb on + strand, within feoAat 3538.311 kb on + strand, within feoAat 3538.319 kb on + strand, within feoAat 3538.319 kb on - strand, within feoAat 3538.319 kb on - strand, within feoAat 3538.319 kb on - strand, within feoAat 3538.319 kb on - strand, within feoAat 3538.319 kb on - strand, within feoAat 3538.324 kb on + strand, within feoAat 3538.332 kb on - strand, within feoAat 3538.335 kb on + strand, within feoAat 3538.335 kb on + strand, within feoAat 3538.336 kb on - strand, within feoAat 3538.336 kb on - strandat 3538.336 kb on - strand, within feoAat 3538.339 kb on + strand, within feoAat 3538.342 kb on + strand, within feoAat 3538.342 kb on + strand, within feoAat 3538.342 kb on - strand, within feoAat 3538.344 kb on - strand, within feoAat 3538.348 kb on + strand, within feoAat 3538.348 kb on + strand, within feoAat 3538.352 kb on - strand, within feoAat 3538.352 kb on - strand, within feoAat 3538.353 kb on + strand, within feoAat 3538.353 kb on + strand, within feoAat 3538.359 kb on + strand, within feoAat 3538.361 kb on - strand, within feoAat 3538.362 kb on - strand, within feoAat 3538.362 kb on - strand, within feoAat 3538.362 kb on - strand, within feoAat 3538.362 kb on - strand, within feoAat 3538.384 kb on + strand, within feoAat 3538.384 kb on + strand, within feoAat 3538.392 kb on - strandat 3538.392 kb on - strandat 3538.417 kb on - strandat 3538.417 kb on - strandat 3538.455 kb on - strandat 3538.494 kb on + strandat 3538.494 kb on + strandat 3538.494 kb on + strandat 3538.501 kb on + strandat 3538.501 kb on + strandat 3538.507 kb on + strandat 3538.511 kb on + strandat 3538.512 kb on + strandat 3538.512 kb on + strandat 3538.515 kb on - strandat 3538.516 kb on + strandat 3538.516 kb on + strandat 3538.517 kb on - strandat 3538.517 kb on - strandat 3538.518 kb on + strandat 3538.524 kb on - strandat 3538.526 kb on - strandat 3538.532 kb on + strandat 3538.532 kb on + strandat 3538.534 kb on - strandat 3538.539 kb on - strandat 3538.540 kb on - strandat 3538.540 kb on - strandat 3538.540 kb on - strandat 3538.540 kb on - strandat 3538.546 kb on + strandat 3538.563 kb on + strandat 3538.563 kb on + strandat 3538.563 kb on + strandat 3538.568 kb on - strandat 3538.571 kb on - strandat 3538.586 kb on + strandat 3538.586 kb on + strandat 3538.586 kb on + strandat 3538.588 kb on + strandat 3538.589 kb on - strandat 3538.593 kb on - strandat 3538.596 kb on - strandat 3538.597 kb on - strandat 3538.597 kb on - strandat 3538.607 kb on - strandat 3538.615 kb on - strandat 3538.633 kb on - strandat 3538.633 kb on - strandat 3538.635 kb on + strandat 3538.650 kb on - strandat 3538.665 kb on - strand, within feoBat 3538.665 kb on - strand, within feoBat 3538.669 kb on + strandat 3538.669 kb on + strand, within feoBat 3538.673 kb on - strand, within feoBat 3538.712 kb on + strand, within feoBat 3538.719 kb on + strand, within feoBat 3538.738 kb on - strand, within feoBat 3538.738 kb on - strand, within feoBat 3538.744 kb on + strand, within feoBat 3538.750 kb on + strand, within feoBat 3538.750 kb on + strand, within feoBat 3538.767 kb on + strand, within feoBat 3538.775 kb on - strand, within feoBat 3538.783 kb on - strand, within feoBat 3538.793 kb on - strand, within feoBat 3538.793 kb on - strand, within feoBat 3538.807 kb on - strand, within feoBat 3538.807 kb on - strand, within feoBat 3538.846 kb on + strand, within feoBat 3538.846 kb on + strand, within feoBat 3538.846 kb on + strand, within feoBat 3538.854 kb on - strand, within feoBat 3538.854 kb on - strand, within feoBat 3538.854 kb on - strand, within feoBat 3538.923 kb on + strand, within feoBat 3538.946 kb on - strand, within feoBat 3538.955 kb on + strand, within feoBat 3538.965 kb on + strand, within feoBat 3539.031 kb on + strand, within feoBat 3539.094 kb on + strand, within feoBat 3539.149 kb on + strand, within feoBat 3539.149 kb on + strand, within feoBat 3539.157 kb on - strand, within feoBat 3539.157 kb on - strand, within feoBat 3539.176 kb on - strand, within feoBat 3539.186 kb on - strand, within feoBat 3539.186 kb on - strand, within feoBat 3539.205 kb on + strand, within feoBat 3539.214 kb on + strand, within feoBat 3539.217 kb on + strand, within feoBat 3539.217 kb on + strand, within feoBat 3539.227 kb on - strand, within feoBat 3539.258 kb on - strand, within feoBat 3539.260 kb on - strand, within feoBat 3539.260 kb on - strand, within feoBat 3539.296 kb on + strand, within feoBat 3539.343 kb on + strand, within feoBat 3539.353 kb on + strand, within feoBat 3539.394 kb on + strand, within feoB

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Per-strain Table

Position Strand Gene LocusTag Fraction Ste41
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3,537,187 + yhgF b3407 0.77 +1.7
3,537,187 + yhgF b3407 0.77 -1.4
3,537,187 - yhgF b3407 0.77 +1.1
3,537,187 - yhgF b3407 0.77 +2.7
3,537,188 - yhgF b3407 0.77 +4.9
3,537,202 + yhgF b3407 0.77 -1.4
3,537,202 + yhgF b3407 0.77 +2.3
3,537,225 + yhgF b3407 0.78 +0.1
3,537,260 + yhgF b3407 0.80 -2.3
3,537,260 + yhgF b3407 0.80 +0.0
3,537,268 - yhgF b3407 0.80 +0.4
3,537,346 + yhgF b3407 0.84 +3.1
3,537,346 + yhgF b3407 0.84 -0.3
3,537,423 + yhgF b3407 0.87 +0.7
3,537,423 + yhgF b3407 0.87 +0.0
3,537,423 + yhgF b3407 0.87 +0.4
3,537,431 - yhgF b3407 0.87 -2.6
3,537,446 - yhgF b3407 0.88 -0.5
3,537,482 - yhgF b3407 0.89 -2.1
3,537,560 - +1.5
3,537,566 - -2.0
3,537,655 + +1.2
3,537,663 - -2.6
3,537,663 - +2.3
3,537,663 - -1.1
3,537,693 + -0.1
3,537,695 - +1.8
3,537,730 + -2.5
3,537,735 + +2.2
3,537,738 - -1.9
3,537,740 + -1.0
3,537,740 + +1.3
3,537,763 + -3.0
3,537,766 + -1.9
3,537,774 - -1.7
3,537,776 + +1.1
3,537,784 + -0.1
3,537,784 - -2.3
3,537,784 - -1.6
3,537,784 - -0.6
3,537,784 - -1.4
3,537,785 + -0.9
3,537,785 + +3.0
3,537,796 + +2.6
3,537,810 + -1.4
3,537,816 - -1.4
3,537,819 + -2.5
3,537,819 + +2.0
3,537,819 + -3.1
3,537,827 - +2.1
3,537,827 - -1.0
3,537,868 - +1.4
3,537,868 - -3.3
3,537,868 - -1.7
3,537,868 - -1.7
3,537,934 + -1.9
3,537,943 - +1.6
3,537,943 - +0.5
3,537,964 - -1.4
3,537,964 - -0.1
3,537,987 - +1.1
3,537,987 - -3.0
3,537,987 - +1.3
3,537,990 + -2.0
3,538,000 + -1.6
3,538,000 + +1.4
3,538,034 + -2.6
3,538,036 + -0.1
3,538,036 + -0.1
3,538,042 - +0.7
3,538,044 - +0.6
3,538,044 - -1.1
3,538,080 + +0.1
3,538,080 + -2.0
3,538,111 + -2.6
3,538,119 - +1.8
3,538,123 + +4.2
3,538,140 + +2.7
3,538,140 + -1.1
3,538,142 + +0.7
3,538,142 + +3.5
3,538,150 + +4.8
3,538,155 - +0.5
3,538,163 + +2.4
3,538,172 + -1.8
3,538,172 + -0.5
3,538,172 - +2.4
3,538,185 + -0.1
3,538,185 + -2.5
3,538,193 - -2.4
3,538,193 - +0.4
3,538,193 - +1.3
3,538,195 + +1.8
3,538,204 - -1.4
3,538,204 - +4.8
3,538,219 - feoA b3408 0.15 +1.0
3,538,240 + feoA b3408 0.24 +0.4
3,538,240 + feoA b3408 0.24 +3.1
3,538,267 + feoA b3408 0.36 +0.6
3,538,273 + feoA b3408 0.39 -2.1
3,538,273 + feoA b3408 0.39 +0.8
3,538,275 - feoA b3408 0.39 -3.0
3,538,275 - feoA b3408 0.39 +1.9
3,538,277 + feoA b3408 0.40 -0.6
3,538,277 + feoA b3408 0.40 -0.9
3,538,279 + feoA b3408 0.41 +0.6
3,538,291 + feoA b3408 0.46 -0.6
3,538,297 + feoA b3408 0.49 +1.1
3,538,299 + feoA b3408 0.50 -0.3
3,538,299 - feoA b3408 0.50 -1.2
3,538,301 + feoA b3408 0.51 +0.9
3,538,301 + feoA b3408 0.51 +1.5
3,538,301 + feoA b3408 0.51 +1.0
3,538,306 + feoA b3408 0.53 -1.1
3,538,307 - feoA b3408 0.54 -2.6
3,538,309 + feoA b3408 0.54 -0.8
3,538,311 + feoA b3408 0.55 +0.5
3,538,311 + feoA b3408 0.55 +1.7
3,538,319 + feoA b3408 0.59 -1.1
3,538,319 - feoA b3408 0.59 +2.9
3,538,319 - feoA b3408 0.59 -1.9
3,538,319 - feoA b3408 0.59 +2.5
3,538,319 - feoA b3408 0.59 +1.3
3,538,319 - feoA b3408 0.59 -0.9
3,538,324 + feoA b3408 0.61 +0.6
3,538,332 - feoA b3408 0.64 -1.5
3,538,335 + feoA b3408 0.66 +0.3
3,538,335 + feoA b3408 0.66 +0.4
3,538,336 - feoA b3408 0.66 +1.8
3,538,336 - +2.0
3,538,336 - feoA b3408 0.66 +2.0
3,538,339 + feoA b3408 0.68 -0.1
3,538,342 + feoA b3408 0.69 +2.3
3,538,342 + feoA b3408 0.69 -2.1
3,538,342 - feoA b3408 0.69 -1.5
3,538,344 - feoA b3408 0.70 -1.1
3,538,348 + feoA b3408 0.71 +2.1
3,538,348 + feoA b3408 0.71 +1.1
3,538,352 - feoA b3408 0.73 +1.0
3,538,352 - feoA b3408 0.73 -1.1
3,538,353 + feoA b3408 0.74 -2.3
3,538,353 + feoA b3408 0.74 -0.9
3,538,359 + feoA b3408 0.76 -2.3
3,538,361 - feoA b3408 0.77 +1.2
3,538,362 - feoA b3408 0.78 +1.8
3,538,362 - feoA b3408 0.78 +2.7
3,538,362 - feoA b3408 0.78 -1.7
3,538,362 - feoA b3408 0.78 -2.0
3,538,384 + feoA b3408 0.87 -2.5
3,538,384 + feoA b3408 0.87 -0.6
3,538,392 - +1.3
3,538,392 - +1.1
3,538,417 - +2.1
3,538,417 - +0.2
3,538,455 - +0.4
3,538,494 + -0.7
3,538,494 + +1.9
3,538,494 + +1.1
3,538,501 + -1.7
3,538,501 + -2.6
3,538,507 + +2.2
3,538,511 + -0.5
3,538,512 + -0.4
3,538,512 + -2.1
3,538,515 - +1.6
3,538,516 + +2.4
3,538,516 + +0.6
3,538,517 - +2.9
3,538,517 - -1.4
3,538,518 + -0.2
3,538,524 - +1.2
3,538,526 - +0.9
3,538,532 + +3.0
3,538,532 + +1.4
3,538,534 - +1.0
3,538,539 - +1.3
3,538,540 - -0.4
3,538,540 - -0.1
3,538,540 - -2.1
3,538,540 - +1.1
3,538,546 + +0.9
3,538,563 + -1.6
3,538,563 + -0.3
3,538,563 + +3.2
3,538,568 - -2.9
3,538,571 - +1.0
3,538,586 + +1.8
3,538,586 + +0.4
3,538,586 + +2.0
3,538,588 + +1.7
3,538,589 - +1.1
3,538,593 - +2.5
3,538,596 - -1.0
3,538,597 - +1.0
3,538,597 - -2.6
3,538,607 - +0.8
3,538,615 - -2.1
3,538,633 - +1.3
3,538,633 - +1.4
3,538,635 + +0.9
3,538,650 - +1.8
3,538,665 - feoB b3409 0.10 +2.6
3,538,665 - feoB b3409 0.10 -1.6
3,538,669 + +1.0
3,538,669 + feoB b3409 0.10 +1.8
3,538,673 - feoB b3409 0.11 +0.3
3,538,712 + feoB b3409 0.12 +1.7
3,538,719 + feoB b3409 0.12 -0.2
3,538,738 - feoB b3409 0.13 +1.1
3,538,738 - feoB b3409 0.13 +0.3
3,538,744 + feoB b3409 0.14 +1.9
3,538,750 + feoB b3409 0.14 -0.1
3,538,750 + feoB b3409 0.14 +1.4
3,538,767 + feoB b3409 0.15 -1.7
3,538,775 - feoB b3409 0.15 +1.5
3,538,783 - feoB b3409 0.15 -3.0
3,538,793 - feoB b3409 0.16 +2.0
3,538,793 - feoB b3409 0.16 -1.6
3,538,807 - feoB b3409 0.16 +0.4
3,538,807 - feoB b3409 0.16 +1.4
3,538,846 + feoB b3409 0.18 +2.7
3,538,846 + feoB b3409 0.18 -0.5
3,538,846 + feoB b3409 0.18 +2.6
3,538,854 - feoB b3409 0.18 +1.8
3,538,854 - feoB b3409 0.18 +0.9
3,538,854 - feoB b3409 0.18 +1.1
3,538,923 + feoB b3409 0.21 +0.8
3,538,946 - feoB b3409 0.22 -2.8
3,538,955 + feoB b3409 0.23 -3.7
3,538,965 + feoB b3409 0.23 +0.2
3,539,031 + feoB b3409 0.26 +0.4
3,539,094 + feoB b3409 0.29 +1.8
3,539,149 + feoB b3409 0.31 +2.3
3,539,149 + feoB b3409 0.31 +0.9
3,539,157 - feoB b3409 0.31 +0.6
3,539,157 - feoB b3409 0.31 +2.3
3,539,176 - feoB b3409 0.32 -0.6
3,539,186 - feoB b3409 0.33 -1.6
3,539,186 - feoB b3409 0.33 -1.4
3,539,205 + feoB b3409 0.33 +1.8
3,539,214 + feoB b3409 0.34 +0.4
3,539,217 + feoB b3409 0.34 +1.7
3,539,217 + feoB b3409 0.34 -1.0
3,539,227 - feoB b3409 0.34 +2.2
3,539,258 - feoB b3409 0.36 +0.8
3,539,260 - feoB b3409 0.36 -3.1
3,539,260 - feoB b3409 0.36 +1.9
3,539,296 + feoB b3409 0.37 +2.0
3,539,343 + feoB b3409 0.39 -0.1
3,539,353 + feoB b3409 0.40 +1.4
3,539,394 + feoB b3409 0.42 -2.7

Or see this region's nucleotide sequence