Experiment: Ste41
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yeiI and yeiJ are separated by 106 nucleotides yeiJ and rihB are separated by 99 nucleotides
b2160: yeiI - predicted kinase (NCBI), at 2,249,722 to 2,250,810
yeiI
b2161: yeiJ - predicted nucleoside transporter (NCBI), at 2,250,917 to 2,252,167
yeiJ
b2162: rihB - ribonucleoside hydrolase 2 (NCBI), at 2,252,267 to 2,253,208
rihB
Position (kb)
2250
2251
2252
2253 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2250.009 kb on + strand, within yeiI at 2250.009 kb on + strand, within yeiI at 2250.121 kb on - strand, within yeiI at 2250.126 kb on - strand, within yeiI at 2250.314 kb on - strand, within yeiI at 2250.314 kb on - strand, within yeiI at 2250.332 kb on - strand, within yeiI at 2250.333 kb on + strand, within yeiI at 2250.341 kb on - strand, within yeiI at 2250.500 kb on - strand, within yeiI at 2250.620 kb on + strand, within yeiI at 2250.620 kb on + strand, within yeiI at 2250.640 kb on - strand, within yeiI at 2250.640 kb on - strand, within yeiI at 2250.667 kb on + strand, within yeiI at 2250.761 kb on + strand at 2250.761 kb on + strand at 2250.761 kb on + strand at 2250.761 kb on + strand at 2250.769 kb on - strand at 2250.769 kb on - strand at 2250.916 kb on - strand at 2250.937 kb on + strand at 2250.937 kb on + strand at 2251.136 kb on - strand, within yeiJ at 2251.247 kb on - strand, within yeiJ at 2251.251 kb on - strand, within yeiJ at 2251.503 kb on + strand, within yeiJ at 2251.550 kb on - strand, within yeiJ at 2251.550 kb on - strand, within yeiJ at 2251.583 kb on - strand, within yeiJ at 2251.627 kb on + strand, within yeiJ at 2251.627 kb on + strand, within yeiJ at 2251.736 kb on + strand, within yeiJ at 2251.736 kb on + strand, within yeiJ at 2251.823 kb on - strand, within yeiJ at 2251.823 kb on - strand, within yeiJ at 2251.979 kb on - strand, within yeiJ at 2251.979 kb on - strand, within yeiJ at 2252.031 kb on - strand, within yeiJ at 2252.037 kb on - strand, within yeiJ at 2252.129 kb on - strand at 2252.252 kb on + strand at 2252.252 kb on + strand at 2252.305 kb on - strand at 2252.403 kb on - strand, within rihB at 2252.403 kb on - strand, within rihB at 2252.561 kb on + strand, within rihB at 2252.566 kb on + strand, within rihB at 2252.616 kb on - strand, within rihB at 2252.727 kb on - strand, within rihB at 2252.744 kb on + strand, within rihB at 2252.800 kb on + strand, within rihB at 2252.808 kb on - strand, within rihB at 2252.873 kb on - strand, within rihB at 2252.907 kb on + strand, within rihB at 2252.907 kb on + strand, within rihB at 2252.911 kb on + strand, within rihB at 2252.915 kb on - strand, within rihB at 2252.938 kb on - strand, within rihB at 2252.945 kb on + strand, within rihB at 2252.949 kb on + strand, within rihB at 2252.950 kb on + strand, within rihB at 2252.950 kb on + strand, within rihB at 2252.990 kb on + strand, within rihB at 2252.992 kb on + strand, within rihB at 2252.994 kb on + strand, within rihB at 2252.999 kb on - strand, within rihB at 2253.000 kb on - strand, within rihB at 2253.000 kb on - strand, within rihB at 2253.002 kb on - strand, within rihB at 2253.002 kb on - strand, within rihB at 2253.018 kb on - strand, within rihB at 2253.020 kb on + strand, within rihB at 2253.020 kb on + strand, within rihB at 2253.064 kb on + strand, within rihB at 2253.100 kb on + strand, within rihB at 2253.102 kb on + strand, within rihB at 2253.146 kb on + strand at 2253.146 kb on + strand at 2253.146 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ste41 remove 2,250,009 + yeiI b2160 0.26 -3.5 2,250,009 + yeiI b2160 0.26 +0.6 2,250,121 - yeiI b2160 0.37 +1.6 2,250,126 - yeiI b2160 0.37 +1.5 2,250,314 - yeiI b2160 0.54 -1.6 2,250,314 - yeiI b2160 0.54 -0.3 2,250,332 - yeiI b2160 0.56 -2.4 2,250,333 + yeiI b2160 0.56 -0.1 2,250,341 - yeiI b2160 0.57 +0.7 2,250,500 - yeiI b2160 0.71 +0.3 2,250,620 + yeiI b2160 0.82 +1.7 2,250,620 + yeiI b2160 0.82 +0.3 2,250,640 - yeiI b2160 0.84 +0.3 2,250,640 - yeiI b2160 0.84 -0.6 2,250,667 + yeiI b2160 0.87 -1.3 2,250,761 + -0.3 2,250,761 + +1.5 2,250,761 + -1.1 2,250,761 + +0.4 2,250,769 - -0.9 2,250,769 - +4.0 2,250,916 - +0.8 2,250,937 + -1.6 2,250,937 + -1.7 2,251,136 - yeiJ b2161 0.18 -0.2 2,251,247 - yeiJ b2161 0.26 +1.2 2,251,251 - yeiJ b2161 0.27 -0.1 2,251,503 + yeiJ b2161 0.47 -2.6 2,251,550 - yeiJ b2161 0.51 +0.5 2,251,550 - yeiJ b2161 0.51 +0.8 2,251,583 - yeiJ b2161 0.53 -0.8 2,251,627 + yeiJ b2161 0.57 -0.3 2,251,627 + yeiJ b2161 0.57 +0.1 2,251,736 + yeiJ b2161 0.65 -0.3 2,251,736 + yeiJ b2161 0.65 +1.7 2,251,823 - yeiJ b2161 0.72 -2.9 2,251,823 - yeiJ b2161 0.72 -2.9 2,251,979 - yeiJ b2161 0.85 -0.2 2,251,979 - yeiJ b2161 0.85 -1.7 2,252,031 - yeiJ b2161 0.89 -0.9 2,252,037 - yeiJ b2161 0.90 -1.1 2,252,129 - +0.3 2,252,252 + -0.5 2,252,252 + -0.3 2,252,305 - -1.2 2,252,403 - rihB b2162 0.14 +0.9 2,252,403 - rihB b2162 0.14 -0.2 2,252,561 + rihB b2162 0.31 +0.3 2,252,566 + rihB b2162 0.32 -0.2 2,252,616 - rihB b2162 0.37 -2.4 2,252,727 - rihB b2162 0.49 +1.7 2,252,744 + rihB b2162 0.51 +0.7 2,252,800 + rihB b2162 0.57 -2.2 2,252,808 - rihB b2162 0.57 +0.1 2,252,873 - rihB b2162 0.64 +0.1 2,252,907 + rihB b2162 0.68 -1.1 2,252,907 + rihB b2162 0.68 -0.6 2,252,911 + rihB b2162 0.68 +0.9 2,252,915 - rihB b2162 0.69 +1.6 2,252,938 - rihB b2162 0.71 -0.9 2,252,945 + rihB b2162 0.72 +0.3 2,252,949 + rihB b2162 0.72 +0.7 2,252,950 + rihB b2162 0.73 +1.7 2,252,950 + rihB b2162 0.73 +0.1 2,252,990 + rihB b2162 0.77 +0.2 2,252,992 + rihB b2162 0.77 +2.0 2,252,994 + rihB b2162 0.77 -1.5 2,252,999 - rihB b2162 0.78 +0.7 2,253,000 - rihB b2162 0.78 +4.0 2,253,000 - rihB b2162 0.78 +1.7 2,253,002 - rihB b2162 0.78 -1.1 2,253,002 - rihB b2162 0.78 +1.7 2,253,018 - rihB b2162 0.80 +0.7 2,253,020 + rihB b2162 0.80 +0.3 2,253,020 + rihB b2162 0.80 +0.7 2,253,064 + rihB b2162 0.85 -0.6 2,253,100 + rihB b2162 0.88 -1.5 2,253,102 + rihB b2162 0.89 +1.7 2,253,146 + -0.6 2,253,146 + +0.7 2,253,146 + +1.7
Or see this region's nucleotide sequence