Strain Fitness in Escherichia coli BW25113 around b0760

Experiment: Ste41

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntgalE and modF are separated by 260 nucleotidesmodF and modE are separated by 67 nucleotidesmodE and ybhT are separated by 128 nucleotides b0759: galE - UDP-galactose-4-epimerase (VIMSS), at 790,262 to 791,278 galE b0760: modF - fused molybdate transporter subunits of ABC superfamily: ATP-binding components (NCBI), at 791,539 to 793,011 modF b0761: modE - DNA-binding transcriptional dual regulator (NCBI), at 793,079 to 793,867 modE b0762: ybhT - hypothetical protein (NCBI), at 793,996 to 794,145 ybhT Position (kb) 791 792 793 794Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 790.541 kb on + strand, within galEat 790.604 kb on - strand, within galEat 790.604 kb on - strand, within galEat 790.658 kb on + strand, within galEat 790.658 kb on + strand, within galEat 790.668 kb on + strand, within galEat 790.719 kb on + strand, within galEat 790.759 kb on + strand, within galEat 790.950 kb on + strand, within galEat 790.950 kb on + strand, within galEat 791.027 kb on + strand, within galEat 791.027 kb on + strand, within galEat 791.152 kb on - strand, within galEat 791.174 kb on - strand, within galEat 791.293 kb on + strandat 791.293 kb on + strandat 791.565 kb on + strandat 791.603 kb on + strandat 791.684 kb on - strandat 791.684 kb on - strandat 791.727 kb on - strand, within modFat 791.783 kb on - strand, within modFat 791.798 kb on + strand, within modFat 791.798 kb on + strand, within modFat 791.808 kb on + strand, within modFat 791.810 kb on + strand, within modFat 791.818 kb on - strand, within modFat 791.829 kb on - strand, within modFat 791.942 kb on + strand, within modFat 792.075 kb on - strand, within modFat 792.076 kb on - strand, within modFat 792.228 kb on - strand, within modFat 792.450 kb on + strand, within modFat 792.452 kb on - strand, within modFat 792.452 kb on - strand, within modFat 792.473 kb on - strand, within modFat 792.473 kb on - strand, within modFat 792.607 kb on - strand, within modFat 792.607 kb on - strand, within modFat 792.687 kb on - strand, within modFat 792.742 kb on - strand, within modFat 792.744 kb on + strand, within modFat 792.755 kb on + strand, within modFat 792.757 kb on - strand, within modFat 792.757 kb on - strand, within modFat 792.882 kb on - strandat 792.882 kb on - strandat 793.046 kb on + strandat 793.085 kb on - strandat 793.085 kb on - strandat 793.183 kb on + strand, within modEat 793.183 kb on + strand, within modEat 793.191 kb on - strand, within modEat 793.212 kb on + strand, within modEat 793.212 kb on + strand, within modEat 793.213 kb on - strand, within modEat 793.217 kb on + strand, within modEat 793.230 kb on - strand, within modEat 793.230 kb on - strand, within modEat 793.300 kb on - strand, within modEat 793.310 kb on - strand, within modEat 793.538 kb on - strand, within modEat 793.538 kb on - strand, within modEat 793.629 kb on - strand, within modEat 793.629 kb on - strand, within modEat 793.631 kb on + strand, within modEat 793.631 kb on + strand, within modEat 793.636 kb on + strand, within modEat 793.639 kb on - strand, within modEat 793.639 kb on - strand, within modEat 793.639 kb on - strand, within modEat 793.683 kb on - strand, within modEat 793.683 kb on - strand, within modEat 793.685 kb on + strand, within modEat 793.735 kb on + strand, within modEat 793.735 kb on + strand, within modEat 793.837 kb on + strandat 793.847 kb on - strandat 793.864 kb on + strandat 793.864 kb on + strandat 793.872 kb on - strandat 793.872 kb on - strandat 793.942 kb on + strandat 793.942 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ste41
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790,541 + galE b0759 0.27 +2.1
790,604 - galE b0759 0.34 +0.9
790,604 - galE b0759 0.34 +0.8
790,658 + galE b0759 0.39 +1.5
790,658 + galE b0759 0.39 +1.2
790,668 + galE b0759 0.40 -2.5
790,719 + galE b0759 0.45 +2.2
790,759 + galE b0759 0.49 +3.0
790,950 + galE b0759 0.68 +2.6
790,950 + galE b0759 0.68 +1.8
791,027 + galE b0759 0.75 -1.1
791,027 + galE b0759 0.75 -0.7
791,152 - galE b0759 0.88 +0.5
791,174 - galE b0759 0.90 +0.5
791,293 + -0.1
791,293 + -0.8
791,565 + +0.1
791,603 + -1.8
791,684 - +0.7
791,684 - -0.7
791,727 - modF b0760 0.13 -2.9
791,783 - modF b0760 0.17 -2.5
791,798 + modF b0760 0.18 +1.8
791,798 + modF b0760 0.18 +2.1
791,808 + modF b0760 0.18 +0.3
791,810 + modF b0760 0.18 -1.0
791,818 - modF b0760 0.19 -0.2
791,829 - modF b0760 0.20 -0.2
791,942 + modF b0760 0.27 +0.6
792,075 - modF b0760 0.36 -1.6
792,076 - modF b0760 0.36 -1.8
792,228 - modF b0760 0.47 -0.4
792,450 + modF b0760 0.62 +1.8
792,452 - modF b0760 0.62 +0.4
792,452 - modF b0760 0.62 -1.3
792,473 - modF b0760 0.63 +2.1
792,473 - modF b0760 0.63 -0.8
792,607 - modF b0760 0.73 -1.7
792,607 - modF b0760 0.73 -2.7
792,687 - modF b0760 0.78 -0.8
792,742 - modF b0760 0.82 +0.3
792,744 + modF b0760 0.82 -1.5
792,755 + modF b0760 0.83 -1.2
792,757 - modF b0760 0.83 -1.8
792,757 - modF b0760 0.83 +1.3
792,882 - -0.0
792,882 - +2.0
793,046 + -0.0
793,085 - +3.0
793,085 - -0.8
793,183 + modE b0761 0.13 +0.8
793,183 + modE b0761 0.13 -0.2
793,191 - modE b0761 0.14 +1.8
793,212 + modE b0761 0.17 -2.9
793,212 + modE b0761 0.17 -0.2
793,213 - modE b0761 0.17 +0.1
793,217 + modE b0761 0.17 +0.0
793,230 - modE b0761 0.19 +0.4
793,230 - modE b0761 0.19 -2.4
793,300 - modE b0761 0.28 -1.6
793,310 - modE b0761 0.29 -0.3
793,538 - modE b0761 0.58 +1.8
793,538 - modE b0761 0.58 -0.2
793,629 - modE b0761 0.70 -1.8
793,629 - modE b0761 0.70 -0.7
793,631 + modE b0761 0.70 +0.2
793,631 + modE b0761 0.70 -0.5
793,636 + modE b0761 0.71 -0.5
793,639 - modE b0761 0.71 -1.0
793,639 - modE b0761 0.71 -1.8
793,639 - modE b0761 0.71 -2.2
793,683 - modE b0761 0.77 +1.8
793,683 - modE b0761 0.77 -0.4
793,685 + modE b0761 0.77 -1.5
793,735 + modE b0761 0.83 -0.2
793,735 + modE b0761 0.83 -0.5
793,837 + -1.0
793,847 - -0.5
793,864 + -0.8
793,864 + -0.5
793,872 - -0.3
793,872 - -0.2
793,942 + -0.5
793,942 + +1.2

Or see this region's nucleotide sequence