Strain Fitness in Escherichia coli BW25113 around b0327
Experiment: Ste41
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ste41 |
---|---|---|---|---|---|
remove | |||||
343,633 | - | yahL | b0326 | 0.29 | +1.5 |
343,763 | + | yahL | b0326 | 0.44 | +1.5 |
343,767 | + | yahL | b0326 | 0.45 | +1.5 |
343,771 | - | yahL | b0326 | 0.45 | -0.8 |
343,775 | + | yahL | b0326 | 0.46 | +1.5 |
343,775 | + | yahL | b0326 | 0.46 | +1.5 |
343,775 | + | yahL | b0326 | 0.46 | +1.5 |
343,775 | + | yahL | b0326 | 0.46 | +1.5 |
343,819 | - | yahL | b0326 | 0.51 | +1.5 |
343,819 | - | yahL | b0326 | 0.51 | -0.0 |
343,833 | + | yahL | b0326 | 0.53 | +0.5 |
343,852 | + | yahL | b0326 | 0.55 | +0.5 |
343,981 | + | yahL | b0326 | 0.71 | +1.5 |
343,999 | + | yahL | b0326 | 0.73 | +1.5 |
344,077 | - | yahL | b0326 | 0.83 | +0.5 |
344,080 | - | yahL | b0326 | 0.83 | +0.5 |
344,085 | + | yahL | b0326 | 0.84 | +1.5 |
344,107 | + | yahL | b0326 | 0.87 | +1.5 |
344,211 | - | -1.0 | |||
344,216 | - | -1.5 | |||
344,218 | - | -0.9 | |||
344,218 | - | +0.7 | |||
344,218 | - | +0.3 | |||
344,218 | - | +1.3 | |||
344,224 | + | +1.5 | |||
344,232 | - | -1.5 | |||
344,232 | - | -1.3 | |||
344,233 | - | -1.3 | |||
344,239 | - | -1.8 | |||
344,241 | - | +1.2 | |||
344,258 | - | +1.2 | |||
344,270 | + | +0.5 | |||
344,274 | - | +1.3 | |||
344,276 | - | +1.6 | |||
344,294 | + | +0.8 | |||
344,295 | - | -1.0 | |||
344,295 | - | -3.5 | |||
344,297 | - | -1.0 | |||
344,297 | - | +2.7 | |||
344,297 | - | -0.5 | |||
344,300 | - | +0.1 | |||
344,302 | - | -0.5 | |||
344,434 | + | +2.1 | |||
344,501 | - | +0.5 | |||
344,570 | + | +2.5 | |||
344,661 | + | yahM | b0327 | 0.13 | -0.9 |
344,661 | + | yahM | b0327 | 0.13 | +0.4 |
344,713 | + | yahM | b0327 | 0.35 | +1.2 |
344,713 | + | yahM | b0327 | 0.35 | +1.7 |
344,718 | + | yahM | b0327 | 0.37 | -0.3 |
344,718 | + | yahM | b0327 | 0.37 | +1.0 |
344,748 | + | yahM | b0327 | 0.49 | -0.8 |
344,748 | + | yahM | b0327 | 0.49 | -2.5 |
344,749 | + | yahM | b0327 | 0.49 | -0.8 |
344,751 | + | yahM | b0327 | 0.50 | -0.4 |
344,756 | + | yahM | b0327 | 0.52 | -2.9 |
344,756 | - | yahM | b0327 | 0.52 | +1.2 |
344,759 | - | yahM | b0327 | 0.53 | +2.7 |
344,828 | + | yahM | b0327 | 0.81 | +3.4 |
344,849 | - | -2.2 | |||
344,860 | + | -3.3 | |||
344,927 | - | -1.0 | |||
344,927 | - | +0.6 | |||
344,982 | + | yahN | b0328 | 0.14 | -1.9 |
344,982 | + | yahN | b0328 | 0.14 | +1.5 |
344,987 | + | yahN | b0328 | 0.14 | -1.5 |
345,056 | + | yahN | b0328 | 0.25 | +0.5 |
345,059 | - | yahN | b0328 | 0.25 | -0.5 |
345,064 | - | yahN | b0328 | 0.26 | -1.2 |
345,064 | - | yahN | b0328 | 0.26 | +0.5 |
345,065 | - | yahN | b0328 | 0.26 | +0.7 |
345,065 | - | yahN | b0328 | 0.26 | +1.1 |
345,067 | + | yahN | b0328 | 0.26 | -0.1 |
345,075 | - | yahN | b0328 | 0.28 | +0.0 |
345,078 | - | yahN | b0328 | 0.28 | -0.8 |
345,078 | - | yahN | b0328 | 0.28 | +2.2 |
345,103 | + | yahN | b0328 | 0.32 | -1.5 |
345,140 | + | yahN | b0328 | 0.37 | +0.8 |
345,146 | + | yahN | b0328 | 0.38 | +0.5 |
345,195 | - | yahN | b0328 | 0.45 | -1.9 |
345,195 | - | yahN | b0328 | 0.45 | +1.2 |
345,206 | + | yahN | b0328 | 0.47 | +0.5 |
345,210 | + | yahN | b0328 | 0.48 | -2.5 |
345,223 | + | yahN | b0328 | 0.50 | -0.8 |
345,239 | - | yahN | b0328 | 0.52 | +0.9 |
345,248 | + | yahN | b0328 | 0.53 | -0.5 |
345,248 | + | yahN | b0328 | 0.53 | -1.5 |
345,266 | - | yahN | b0328 | 0.56 | -1.0 |
345,311 | + | yahN | b0328 | 0.63 | -2.7 |
345,311 | + | yahN | b0328 | 0.63 | -2.5 |
345,378 | + | yahN | b0328 | 0.73 | -2.7 |
345,387 | - | yahN | b0328 | 0.74 | +0.2 |
345,394 | + | yahN | b0328 | 0.75 | +0.8 |
345,394 | + | yahN | b0328 | 0.75 | +0.8 |
345,402 | + | yahN | b0328 | 0.76 | -2.2 |
345,425 | + | yahN | b0328 | 0.80 | -2.7 |
345,431 | + | yahN | b0328 | 0.81 | +1.8 |
345,440 | + | yahN | b0328 | 0.82 | -0.3 |
345,441 | - | yahN | b0328 | 0.82 | -1.0 |
345,441 | - | yahN | b0328 | 0.82 | -1.8 |
345,486 | + | yahN | b0328 | 0.89 | +0.7 |
345,486 | + | yahN | b0328 | 0.89 | +2.9 |
345,486 | + | yahN | b0328 | 0.89 | -0.5 |
345,486 | + | yahN | b0328 | 0.89 | +1.0 |
345,486 | + | yahN | b0328 | 0.89 | -0.3 |
345,494 | - | +1.9 | |||
345,498 | + | -0.5 | |||
345,498 | + | +1.2 | |||
345,498 | + | +2.0 | |||
345,498 | + | +2.5 | |||
345,506 | - | -1.4 | |||
345,546 | + | -2.3 | |||
345,546 | + | -1.9 | |||
345,654 | - | -0.0 | |||
345,677 | - | +1.3 | |||
345,677 | - | +0.8 | |||
345,689 | - | +3.3 | |||
345,701 | - | +0.5 | |||
345,746 | - | yahO | b0329 | 0.14 | -2.3 |
345,750 | + | yahO | b0329 | 0.15 | -0.5 |
345,754 | + | yahO | b0329 | 0.17 | -1.6 |
345,754 | + | yahO | b0329 | 0.17 | +0.5 |
345,761 | + | yahO | b0329 | 0.19 | -0.3 |
345,761 | + | yahO | b0329 | 0.19 | -0.0 |
345,763 | - | yahO | b0329 | 0.20 | -1.6 |
345,763 | - | yahO | b0329 | 0.20 | -0.5 |
345,774 | + | yahO | b0329 | 0.24 | -2.0 |
345,834 | + | yahO | b0329 | 0.46 | -0.3 |
345,867 | - | yahO | b0329 | 0.58 | -1.3 |
Or see this region's nucleotide sequence