Strain Fitness in Escherichia coli BW25113 around b4099

Experiment: Laval1374

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Laval1374
4,316,654	-	phnK	b4097	0.82	-0.2
4,316,891	-	phnJ	b4098	0.13	-0.2
4,316,929	+	phnJ	b4098	0.17	+0.1
4,316,929	+	phnJ	b4098	0.17	-2.1
4,316,930	-	phnJ	b4098	0.17	+0.1
4,316,932	+	phnJ	b4098	0.17	-1.0
4,317,020	+	phnJ	b4098	0.28	-0.1
4,317,028	-	phnJ	b4098	0.29	-0.7
4,317,034	-	phnJ	b4098	0.30	-0.3
4,317,071	+	phnJ	b4098	0.34	-1.0
4,317,095	+	phnJ	b4098	0.37	-0.1
4,317,114	+	phnJ	b4098	0.39	-0.5
4,317,114	+	phnJ	b4098	0.39	+0.1
4,317,122	-				-0.3
4,317,154	+	phnJ	b4098	0.44	-0.3
4,317,159	+	phnJ	b4098	0.44	-0.4
4,317,168	-	phnJ	b4098	0.45	+0.0
4,317,177	+	phnJ	b4098	0.46	-0.1
4,317,177	+	phnJ	b4098	0.46	+0.6
4,317,210	-	phnJ	b4098	0.50	-0.3
4,317,215	-	phnJ	b4098	0.51	+0.0
4,317,303	+	phnJ	b4098	0.61	-0.5
4,317,340	-	phnJ	b4098	0.66	+0.3
4,317,349	+	phnJ	b4098	0.67	-1.3
4,317,394	-	phnJ	b4098	0.72	-0.6
4,317,402	-	phnJ	b4098	0.73	+0.4
4,317,428	+	phnJ	b4098	0.76	-0.2
4,317,428	+	phnJ	b4098	0.76	-0.3
4,317,481	+	phnJ	b4098	0.82	-0.6
4,317,481	+	phnJ	b4098	0.82	+0.0
4,317,620	+				+0.3
4,317,620	+				-0.3
4,317,631	+				-0.5
4,317,631	+				-0.2
4,317,634	-				-0.0
4,317,639	-				-0.1
4,317,658	-				+0.1
4,317,658	-				+0.5
4,317,686	+				-0.3
4,317,705	+				-0.2
4,317,708	+				+0.4
4,317,708	+				-0.1
4,317,853	+	phnI	b4099	0.22	+0.5
4,317,854	-	phnI	b4099	0.22	-0.7
4,317,980	+	phnI	b4099	0.34	-0.0
4,318,053	+	phnI	b4099	0.40	-0.4
4,318,053	+	phnI	b4099	0.40	-0.2
4,318,081	-	phnI	b4099	0.43	+0.7
4,318,081	-	phnI	b4099	0.43	-0.0
4,318,138	-	phnI	b4099	0.48	-0.1
4,318,217	-	phnI	b4099	0.56	-0.0
4,318,321	-	phnI	b4099	0.66	-0.4
4,318,326	-	phnI	b4099	0.66	+0.0
4,318,392	+	phnI	b4099	0.72	-0.3
4,318,400	+	phnI	b4099	0.73	+0.1
4,318,489	-	phnI	b4099	0.81	-0.6
4,318,549	+	phnI	b4099	0.87	-0.2
4,318,635	-				+0.4
4,318,635	-				+0.0
4,318,687	-				-0.3
4,318,702	-				+0.1
4,318,748	-	phnH	b4100	0.11	+0.0
4,318,799	-	phnH	b4100	0.19	-1.1
4,318,814	+	phnH	b4100	0.22	-0.7
4,318,855	+	phnH	b4100	0.29	-2.4
4,318,855	+	phnH	b4100	0.29	+0.7
4,319,165	+	phnH	b4100	0.82	-1.7
4,319,223	+				+0.2
4,319,223	+				+0.2
4,319,223	+				+0.1
4,319,228	+				-0.0
4,319,258	+				-1.0
4,319,258	+				-0.2
4,319,259	+				-0.2
4,319,274	-				-0.5
4,319,279	-				-0.2
4,319,279	-				+1.4
4,319,354	-	phnG	b4101	0.19	+0.9
4,319,366	-	phnG	b4101	0.22	-0.2
4,319,379	-	phnG	b4101	0.25	-0.4
4,319,434	-	phnG	b4101	0.37	+0.1
4,319,446	-	phnG	b4101	0.40	-0.4
4,319,573	+	phnG	b4101	0.68	+0.9