Strain Fitness in Pseudomonas segetis P6 around MPMX49_03677

Experiment: Apigenin 100 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Apigenin 100 ug/ml
3,861,448	+		MPMX49_03674	0.56	-0.4
3,861,449	-		MPMX49_03674	0.56	-0.3
3,861,459	+		MPMX49_03674	0.58	-0.3
3,861,460	-		MPMX49_03674	0.58	+1.0
3,861,460	-		MPMX49_03674	0.58	-0.0
3,861,460	-		MPMX49_03674	0.58	+0.6
3,861,460	-		MPMX49_03674	0.58	-0.0
3,861,460	-		MPMX49_03674	0.58	+0.4
3,861,614	+		MPMX49_03674	0.85	-0.1
3,861,614	+		MPMX49_03674	0.85	-0.4
3,861,614	+		MPMX49_03674	0.85	-0.6
3,861,615	-		MPMX49_03674	0.86	-0.3
3,861,615	-		MPMX49_03674	0.86	+0.2
3,861,615	-		MPMX49_03674	0.86	-0.3
3,861,615	-		MPMX49_03674	0.86	-0.5
3,861,615	-		MPMX49_03674	0.86	-2.0
3,861,648	+				+0.9
3,861,648	+				-0.2
3,861,648	+				-0.1
3,861,649	-				-0.3
3,861,654	-				-0.5
3,861,654	-				-0.6
3,861,689	+				+0.7
3,861,689	+				+0.4
3,861,693	+				+0.8
3,861,693	+				-0.1
3,861,694	-				-2.3
3,861,744	+		MPMX49_03675	0.12	+0.7
3,861,744	+		MPMX49_03675	0.12	+0.2
3,861,744	+		MPMX49_03675	0.12	-0.2
3,861,745	-		MPMX49_03675	0.13	+0.4
3,861,784	+		MPMX49_03675	0.23	+0.3
3,861,817	+		MPMX49_03675	0.32	-0.1
3,861,817	+		MPMX49_03675	0.32	+0.1
3,861,834	+		MPMX49_03675	0.37	-0.1
3,861,875	+		MPMX49_03675	0.48	-0.7
3,861,875	+		MPMX49_03675	0.48	-0.8
3,861,876	-		MPMX49_03675	0.48	-0.3
3,861,876	-		MPMX49_03675	0.48	-0.6
3,861,876	-		MPMX49_03675	0.48	-0.1
3,861,989	+		MPMX49_03675	0.78	+0.3
3,862,068	-				-0.3
3,862,103	-				+1.1
3,862,114	-				+0.1
3,862,355	-		MPMX49_03676	0.72	-0.4
3,862,419	+				-0.3
3,862,419	+				+0.6
3,862,419	+				+0.4
3,862,435	+				-0.3
3,862,466	+				+0.7
3,862,479	-		MPMX49_03677	0.11	-0.6
3,862,527	+		MPMX49_03677	0.25	-0.4
3,862,528	-		MPMX49_03677	0.25	-1.2
3,862,528	-		MPMX49_03677	0.25	+0.2
3,862,528	-		MPMX49_03677	0.25	+1.1
3,862,533	+		MPMX49_03677	0.26	+0.2
3,862,533	+		MPMX49_03677	0.26	+0.9
3,862,551	-		MPMX49_03677	0.32	+0.7
3,862,783	-				+0.5
3,862,783	-				+0.3
3,862,783	-				-0.2
3,863,015	-		MPMX49_03678	0.18	+0.4
3,863,015	-		MPMX49_03678	0.18	-2.7
3,863,015	-		MPMX49_03678	0.18	-0.0
3,863,121	-		MPMX49_03678	0.29	+0.2
3,863,305	+		MPMX49_03678	0.48	-0.3
3,863,305	+		MPMX49_03678	0.48	+0.2
3,863,305	+		MPMX49_03678	0.48	+0.2
3,863,306	-		MPMX49_03678	0.48	-0.3
3,863,306	-		MPMX49_03678	0.48	-0.3
3,863,306	-		MPMX49_03678	0.48	-0.3
3,863,327	+		MPMX49_03678	0.51	-0.3
3,863,327	+		MPMX49_03678	0.51	-0.9
3,863,327	+		MPMX49_03678	0.51	+0.0
3,863,331	-		MPMX49_03678	0.51	+0.7
3,863,440	+		MPMX49_03678	0.62	-0.4
3,863,441	-		MPMX49_03678	0.63	+0.5
3,863,441	-		MPMX49_03678	0.63	-0.0
3,863,483	+		MPMX49_03678	0.67	-0.4
3,863,483	+		MPMX49_03678	0.67	+0.3
3,863,484	-		MPMX49_03678	0.67	-0.3
3,863,484	-		MPMX49_03678	0.67	+0.4
3,863,485	+		MPMX49_03678	0.67	-0.2
3,863,485	+		MPMX49_03678	0.67	-0.5
3,863,485	+		MPMX49_03678	0.67	-1.3
3,863,486	-		MPMX49_03678	0.67	+0.1
3,863,510	+		MPMX49_03678	0.70	-0.1
3,863,592	-		MPMX49_03678	0.78	+1.0