Experiment: Melibiose (C); 6 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS21110 and ABZR88_RS21115 are separated by 136 nucleotides ABZR88_RS21115 and ABZR88_RS21120 are separated by 109 nucleotides
ABZR88_RS21110: ABZR88_RS21110 - deoxyribodipyrimidine photo-lyase, at 5,101,440 to 5,102,747
_RS21110
ABZR88_RS21115: ABZR88_RS21115 - GIY-YIG nuclease family protein, at 5,102,884 to 5,103,201
_RS21115
ABZR88_RS21120: ABZR88_RS21120 - TIGR01777 family oxidoreductase, at 5,103,311 to 5,104,216
_RS21120
Position (kb) 5102
5103
5104 Strain fitness (log2 ratio) -1
0
1 at 5101.922 kb on + strand, within ABZR88_RS21110 at 5102.270 kb on + strand, within ABZR88_RS21110 at 5102.304 kb on - strand, within ABZR88_RS21110 at 5102.367 kb on - strand, within ABZR88_RS21110 at 5102.404 kb on - strand, within ABZR88_RS21110 at 5102.453 kb on - strand, within ABZR88_RS21110 at 5102.453 kb on - strand, within ABZR88_RS21110 at 5102.579 kb on + strand, within ABZR88_RS21110 at 5102.620 kb on - strand at 5102.808 kb on + strand at 5102.809 kb on - strand at 5102.848 kb on - strand at 5102.911 kb on - strand at 5103.141 kb on + strand, within ABZR88_RS21115 at 5103.176 kb on + strand at 5103.176 kb on + strand at 5103.177 kb on - strand at 5103.177 kb on - strand at 5103.177 kb on - strand at 5103.302 kb on + strand at 5103.302 kb on + strand at 5103.315 kb on + strand at 5103.405 kb on - strand, within ABZR88_RS21120 at 5103.544 kb on + strand, within ABZR88_RS21120 at 5103.624 kb on + strand, within ABZR88_RS21120 at 5103.706 kb on + strand, within ABZR88_RS21120 at 5103.752 kb on + strand, within ABZR88_RS21120 at 5103.797 kb on + strand, within ABZR88_RS21120 at 5103.921 kb on + strand, within ABZR88_RS21120 at 5104.039 kb on + strand, within ABZR88_RS21120 at 5104.119 kb on - strand, within ABZR88_RS21120 at 5104.127 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Melibiose (C); 6 days remove 5,101,922 + ABZR88_RS21110 0.37 -1.0 5,102,270 + ABZR88_RS21110 0.63 -0.1 5,102,304 - ABZR88_RS21110 0.66 -0.1 5,102,367 - ABZR88_RS21110 0.71 +0.6 5,102,404 - ABZR88_RS21110 0.74 +0.9 5,102,453 - ABZR88_RS21110 0.77 +0.0 5,102,453 - ABZR88_RS21110 0.77 -0.1 5,102,579 + ABZR88_RS21110 0.87 +0.4 5,102,620 - -0.0 5,102,808 + +0.0 5,102,809 - +0.8 5,102,848 - -1.5 5,102,911 - -0.4 5,103,141 + ABZR88_RS21115 0.81 -0.8 5,103,176 + +0.5 5,103,176 + +0.7 5,103,177 - -1.6 5,103,177 - -0.5 5,103,177 - -0.7 5,103,302 + -0.3 5,103,302 + +0.0 5,103,315 + -1.3 5,103,405 - ABZR88_RS21120 0.10 -1.0 5,103,544 + ABZR88_RS21120 0.26 -0.4 5,103,624 + ABZR88_RS21120 0.35 +0.8 5,103,706 + ABZR88_RS21120 0.44 +0.3 5,103,752 + ABZR88_RS21120 0.49 -0.9 5,103,797 + ABZR88_RS21120 0.54 +0.1 5,103,921 + ABZR88_RS21120 0.67 -0.6 5,104,039 + ABZR88_RS21120 0.80 -0.1 5,104,119 - ABZR88_RS21120 0.89 -0.8 5,104,127 + -0.6
Or see this region's nucleotide sequence