Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS18270

Experiment: Melibiose (C); 6 days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS18265 and ABZR88_RS18270 overlap by 23 nucleotidesABZR88_RS18270 and ABZR88_RS18275 are separated by 15 nucleotides ABZR88_RS18265: ABZR88_RS18265 - tetratricopeptide repeat protein, at 4,454,267 to 4,456,009 _RS18265 ABZR88_RS18270: ABZR88_RS18270 - DUF4292 domain-containing protein, at 4,455,987 to 4,456,799 _RS18270 ABZR88_RS18275: ABZR88_RS18275 - murein hydrolase activator EnvC, at 4,456,815 to 4,458,104 _RS18275 Position (kb) 4455 4456 4457Strain fitness (log2 ratio) -3 -2 -1 0 1at 4455.122 kb on + strand, within ABZR88_RS18265at 4455.449 kb on + strand, within ABZR88_RS18265at 4455.453 kb on + strand, within ABZR88_RS18265at 4455.468 kb on - strand, within ABZR88_RS18265at 4455.497 kb on - strand, within ABZR88_RS18265at 4455.620 kb on + strand, within ABZR88_RS18265at 4455.626 kb on - strand, within ABZR88_RS18265at 4456.001 kb on - strandat 4456.059 kb on - strandat 4456.401 kb on + strand, within ABZR88_RS18270at 4456.401 kb on + strand, within ABZR88_RS18270at 4456.475 kb on - strand, within ABZR88_RS18270at 4456.549 kb on - strand, within ABZR88_RS18270at 4456.561 kb on + strand, within ABZR88_RS18270at 4456.562 kb on - strand, within ABZR88_RS18270at 4456.726 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Melibiose (C); 6 days
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4,455,122 + ABZR88_RS18265 0.49 -1.2
4,455,449 + ABZR88_RS18265 0.68 -1.2
4,455,453 + ABZR88_RS18265 0.68 +0.7
4,455,468 - ABZR88_RS18265 0.69 -0.8
4,455,497 - ABZR88_RS18265 0.71 +0.9
4,455,620 + ABZR88_RS18265 0.78 -0.5
4,455,626 - ABZR88_RS18265 0.78 +0.3
4,456,001 - -0.3
4,456,059 - +0.1
4,456,401 + ABZR88_RS18270 0.51 -3.3
4,456,401 + ABZR88_RS18270 0.51 +0.7
4,456,475 - ABZR88_RS18270 0.60 +0.4
4,456,549 - ABZR88_RS18270 0.69 -0.9
4,456,561 + ABZR88_RS18270 0.71 -0.6
4,456,562 - ABZR88_RS18270 0.71 -0.3
4,456,726 - +0.3

Or see this region's nucleotide sequence