Experiment: Melibiose (C); 6 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS17670 and ABZR88_RS17675 are separated by 15 nucleotides ABZR88_RS17675 and ABZR88_RS17680 overlap by 1 nucleotides ABZR88_RS17680 and ABZR88_RS17685 overlap by 4 nucleotides ABZR88_RS17685 and ABZR88_RS17690 are separated by 46 nucleotides
ABZR88_RS17670: ABZR88_RS17670 - glycosyltransferase family 4 protein, at 4,320,519 to 4,321,712
_RS17670
ABZR88_RS17675: ABZR88_RS17675 - DUF5672 family protein, at 4,321,728 to 4,322,549
_RS17675
ABZR88_RS17680: ABZR88_RS17680 - glycosyl transferase, at 4,322,549 to 4,323,547
_RS17680
ABZR88_RS17685: ABZR88_RS17685 - acyltransferase, at 4,323,544 to 4,324,125
_RS17685
ABZR88_RS17690: ABZR88_RS17690 - glycosyltransferase family A protein, at 4,324,172 to 4,325,194
_RS17690
Position (kb) 4322
4323
4324 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4321.707 kb on - strand at 4321.747 kb on + strand at 4321.748 kb on - strand at 4321.835 kb on + strand, within ABZR88_RS17675 at 4321.835 kb on + strand, within ABZR88_RS17675 at 4322.041 kb on - strand, within ABZR88_RS17675 at 4322.067 kb on - strand, within ABZR88_RS17675 at 4322.083 kb on - strand, within ABZR88_RS17675 at 4322.264 kb on - strand, within ABZR88_RS17675 at 4322.274 kb on - strand, within ABZR88_RS17675 at 4322.328 kb on - strand, within ABZR88_RS17675 at 4322.399 kb on - strand, within ABZR88_RS17675 at 4322.517 kb on + strand at 4322.944 kb on + strand, within ABZR88_RS17680 at 4323.194 kb on + strand, within ABZR88_RS17680 at 4323.308 kb on - strand, within ABZR88_RS17680 at 4323.508 kb on - strand at 4323.512 kb on - strand at 4323.512 kb on - strand at 4323.521 kb on + strand at 4323.526 kb on + strand at 4323.771 kb on + strand, within ABZR88_RS17685 at 4323.846 kb on + strand, within ABZR88_RS17685 at 4323.854 kb on - strand, within ABZR88_RS17685 at 4323.924 kb on - strand, within ABZR88_RS17685 at 4323.928 kb on - strand, within ABZR88_RS17685 at 4323.963 kb on + strand, within ABZR88_RS17685 at 4323.986 kb on + strand, within ABZR88_RS17685 at 4324.027 kb on - strand, within ABZR88_RS17685 at 4324.261 kb on - strand at 4324.268 kb on - strand at 4324.281 kb on + strand, within ABZR88_RS17690 at 4324.349 kb on + strand, within ABZR88_RS17690 at 4324.349 kb on + strand, within ABZR88_RS17690 at 4324.350 kb on - strand, within ABZR88_RS17690 at 4324.382 kb on - strand, within ABZR88_RS17690
Per-strain Table
Position Strand Gene LocusTag Fraction Melibiose (C); 6 days remove 4,321,707 - +0.9 4,321,747 + +0.1 4,321,748 - -0.7 4,321,835 + ABZR88_RS17675 0.13 -1.5 4,321,835 + ABZR88_RS17675 0.13 -0.4 4,322,041 - ABZR88_RS17675 0.38 -1.4 4,322,067 - ABZR88_RS17675 0.41 -1.3 4,322,083 - ABZR88_RS17675 0.43 -1.4 4,322,264 - ABZR88_RS17675 0.65 -1.2 4,322,274 - ABZR88_RS17675 0.66 -1.6 4,322,328 - ABZR88_RS17675 0.73 -0.4 4,322,399 - ABZR88_RS17675 0.82 -1.7 4,322,517 + -0.1 4,322,944 + ABZR88_RS17680 0.40 -0.8 4,323,194 + ABZR88_RS17680 0.65 -1.0 4,323,308 - ABZR88_RS17680 0.76 -0.7 4,323,508 - -0.7 4,323,512 - -1.4 4,323,512 - -1.4 4,323,521 + +0.4 4,323,526 + -1.4 4,323,771 + ABZR88_RS17685 0.39 +0.1 4,323,846 + ABZR88_RS17685 0.52 +1.8 4,323,854 - ABZR88_RS17685 0.53 -0.2 4,323,924 - ABZR88_RS17685 0.65 +0.5 4,323,928 - ABZR88_RS17685 0.66 +0.0 4,323,963 + ABZR88_RS17685 0.72 -0.5 4,323,986 + ABZR88_RS17685 0.76 +0.5 4,324,027 - ABZR88_RS17685 0.83 +0.0 4,324,261 - -0.5 4,324,268 - -0.2 4,324,281 + ABZR88_RS17690 0.11 -0.8 4,324,349 + ABZR88_RS17690 0.17 -1.4 4,324,349 + ABZR88_RS17690 0.17 -0.3 4,324,350 - ABZR88_RS17690 0.17 -2.0 4,324,382 - ABZR88_RS17690 0.21 +0.5
Or see this region's nucleotide sequence