Experiment: Melibiose (C); 6 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS15275 and ABZR88_RS15280 are separated by 56 nucleotides ABZR88_RS15280 and ABZR88_RS15285 are separated by 71 nucleotides
ABZR88_RS15275: ABZR88_RS15275 - L-fucose:H+ symporter permease, at 3,782,155 to 3,783,456
_RS15275
ABZR88_RS15280: ABZR88_RS15280 - hypothetical protein, at 3,783,513 to 3,783,749
_RS15280
ABZR88_RS15285: ABZR88_RS15285 - DNA ligase D, at 3,783,821 to 3,786,544
_RS15285
Position (kb)
3783
3784 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 3782.526 kb on + strand, within ABZR88_RS15275 at 3782.667 kb on + strand, within ABZR88_RS15275 at 3782.748 kb on - strand, within ABZR88_RS15275 at 3782.807 kb on + strand, within ABZR88_RS15275 at 3782.905 kb on - strand, within ABZR88_RS15275 at 3783.036 kb on + strand, within ABZR88_RS15275 at 3783.039 kb on - strand, within ABZR88_RS15275 at 3783.039 kb on - strand, within ABZR88_RS15275 at 3783.152 kb on + strand, within ABZR88_RS15275 at 3783.153 kb on - strand, within ABZR88_RS15275 at 3783.153 kb on - strand, within ABZR88_RS15275 at 3783.153 kb on - strand, within ABZR88_RS15275 at 3783.176 kb on - strand, within ABZR88_RS15275 at 3783.337 kb on - strand at 3783.422 kb on + strand at 3783.423 kb on - strand at 3783.433 kb on - strand at 3783.433 kb on - strand at 3783.552 kb on + strand, within ABZR88_RS15280 at 3783.591 kb on - strand, within ABZR88_RS15280 at 3783.630 kb on + strand, within ABZR88_RS15280 at 3783.898 kb on + strand at 3783.935 kb on - strand at 3783.935 kb on - strand at 3784.059 kb on - strand at 3784.064 kb on + strand at 3784.066 kb on + strand at 3784.191 kb on + strand, within ABZR88_RS15285 at 3784.319 kb on + strand, within ABZR88_RS15285 at 3784.408 kb on - strand, within ABZR88_RS15285 at 3784.408 kb on - strand, within ABZR88_RS15285 at 3784.706 kb on - strand, within ABZR88_RS15285
Per-strain Table
Position Strand Gene LocusTag Fraction Melibiose (C); 6 days remove 3,782,526 + ABZR88_RS15275 0.28 -0.6 3,782,667 + ABZR88_RS15275 0.39 -0.7 3,782,748 - ABZR88_RS15275 0.46 -0.4 3,782,807 + ABZR88_RS15275 0.50 -0.1 3,782,905 - ABZR88_RS15275 0.58 -0.7 3,783,036 + ABZR88_RS15275 0.68 -0.4 3,783,039 - ABZR88_RS15275 0.68 +1.7 3,783,039 - ABZR88_RS15275 0.68 +6.4 3,783,152 + ABZR88_RS15275 0.77 -1.9 3,783,153 - ABZR88_RS15275 0.77 +0.1 3,783,153 - ABZR88_RS15275 0.77 -0.4 3,783,153 - ABZR88_RS15275 0.77 +1.2 3,783,176 - ABZR88_RS15275 0.78 +2.5 3,783,337 - +0.4 3,783,422 + -0.6 3,783,423 - -0.0 3,783,433 - +0.2 3,783,433 - +0.1 3,783,552 + ABZR88_RS15280 0.16 -0.6 3,783,591 - ABZR88_RS15280 0.33 -0.6 3,783,630 + ABZR88_RS15280 0.49 +0.5 3,783,898 + +0.1 3,783,935 - +0.0 3,783,935 - +0.0 3,784,059 - -0.8 3,784,064 + -0.9 3,784,066 + +0.1 3,784,191 + ABZR88_RS15285 0.14 -1.1 3,784,319 + ABZR88_RS15285 0.18 -1.2 3,784,408 - ABZR88_RS15285 0.22 +0.3 3,784,408 - ABZR88_RS15285 0.22 +0.7 3,784,706 - ABZR88_RS15285 0.32 +1.5
Or see this region's nucleotide sequence