Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS06875

Experiment: Melibiose (C); 6 days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS06870 and ABZR88_RS06875 overlap by 4 nucleotidesABZR88_RS06875 and ABZR88_RS06880 are separated by 136 nucleotides ABZR88_RS06870: ABZR88_RS06870 - bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB, at 1,679,902 to 1,681,053 _RS06870 ABZR88_RS06875: ABZR88_RS06875 - histidinol-phosphate transaminase, at 1,681,050 to 1,682,096 _RS06875 ABZR88_RS06880: ABZR88_RS06880 - histidinol dehydrogenase, at 1,682,233 to 1,683,516 _RS06880 Position (kb) 1681 1682 1683Strain fitness (log2 ratio) -1 0 1at 1680.060 kb on + strand, within ABZR88_RS06870at 1680.243 kb on + strand, within ABZR88_RS06870at 1681.220 kb on + strand, within ABZR88_RS06875at 1681.499 kb on + strand, within ABZR88_RS06875at 1681.752 kb on + strand, within ABZR88_RS06875at 1681.805 kb on + strand, within ABZR88_RS06875at 1682.913 kb on + strand, within ABZR88_RS06880

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Per-strain Table

Position Strand Gene LocusTag Fraction Melibiose (C); 6 days
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1,680,060 + ABZR88_RS06870 0.14 -1.4
1,680,243 + ABZR88_RS06870 0.30 -0.7
1,681,220 + ABZR88_RS06875 0.16 -0.4
1,681,499 + ABZR88_RS06875 0.43 +1.5
1,681,752 + ABZR88_RS06875 0.67 -1.3
1,681,805 + ABZR88_RS06875 0.72 +0.4
1,682,913 + ABZR88_RS06880 0.53 -0.1

Or see this region's nucleotide sequence