Experiment: Melibiose (C); 6 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS03380 and ABZR88_RS03385 are separated by 24 nucleotides ABZR88_RS03385 and ABZR88_RS03390 are separated by 4 nucleotides ABZR88_RS03390 and ABZR88_RS03395 are separated by 2 nucleotides
ABZR88_RS03380: ABZR88_RS03380 - biliverdin-producing heme oxygenase, at 808,927 to 809,499
_RS03380
ABZR88_RS03385: ABZR88_RS03385 - response regulator, at 809,524 to 809,877
_RS03385
ABZR88_RS03390: ABZR88_RS03390 - response regulator, at 809,882 to 810,301
_RS03390
ABZR88_RS03395: ABZR88_RS03395 - ATP-binding protein, at 810,304 to 812,529
_RS03395
Position (kb) 809
810
811 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 808.920 kb on - strand at 809.168 kb on - strand, within ABZR88_RS03380 at 809.171 kb on + strand, within ABZR88_RS03380 at 809.526 kb on - strand at 809.599 kb on + strand, within ABZR88_RS03385 at 809.655 kb on + strand, within ABZR88_RS03385 at 809.675 kb on - strand, within ABZR88_RS03385 at 809.749 kb on + strand, within ABZR88_RS03385 at 809.772 kb on + strand, within ABZR88_RS03385 at 809.804 kb on + strand, within ABZR88_RS03385 at 809.804 kb on + strand, within ABZR88_RS03385 at 809.804 kb on + strand, within ABZR88_RS03385 at 809.805 kb on - strand, within ABZR88_RS03385 at 809.805 kb on - strand, within ABZR88_RS03385 at 809.805 kb on - strand, within ABZR88_RS03385 at 809.828 kb on - strand, within ABZR88_RS03385 at 809.939 kb on + strand, within ABZR88_RS03390 at 809.948 kb on + strand, within ABZR88_RS03390 at 809.949 kb on - strand, within ABZR88_RS03390 at 809.974 kb on - strand, within ABZR88_RS03390 at 810.065 kb on + strand, within ABZR88_RS03390 at 810.209 kb on - strand, within ABZR88_RS03390 at 810.209 kb on - strand, within ABZR88_RS03390 at 810.212 kb on + strand, within ABZR88_RS03390 at 810.442 kb on - strand at 810.518 kb on + strand at 810.588 kb on + strand, within ABZR88_RS03395 at 810.782 kb on + strand, within ABZR88_RS03395 at 810.790 kb on + strand, within ABZR88_RS03395 at 810.876 kb on + strand, within ABZR88_RS03395 at 810.947 kb on + strand, within ABZR88_RS03395 at 811.151 kb on - strand, within ABZR88_RS03395 at 811.200 kb on + strand, within ABZR88_RS03395 at 811.231 kb on + strand, within ABZR88_RS03395 at 811.294 kb on - strand, within ABZR88_RS03395
Per-strain Table
Position Strand Gene LocusTag Fraction Melibiose (C); 6 days remove 808,920 - -0.6 809,168 - ABZR88_RS03380 0.42 +1.1 809,171 + ABZR88_RS03380 0.43 -0.3 809,526 - +2.7 809,599 + ABZR88_RS03385 0.21 +0.5 809,655 + ABZR88_RS03385 0.37 -0.0 809,675 - ABZR88_RS03385 0.43 -0.2 809,749 + ABZR88_RS03385 0.64 +0.7 809,772 + ABZR88_RS03385 0.70 +1.6 809,804 + ABZR88_RS03385 0.79 +0.3 809,804 + ABZR88_RS03385 0.79 +0.9 809,804 + ABZR88_RS03385 0.79 -0.4 809,805 - ABZR88_RS03385 0.79 +0.7 809,805 - ABZR88_RS03385 0.79 +0.1 809,805 - ABZR88_RS03385 0.79 +0.1 809,828 - ABZR88_RS03385 0.86 +1.2 809,939 + ABZR88_RS03390 0.14 -0.7 809,948 + ABZR88_RS03390 0.16 -0.9 809,949 - ABZR88_RS03390 0.16 -1.5 809,974 - ABZR88_RS03390 0.22 +1.1 810,065 + ABZR88_RS03390 0.44 -0.9 810,209 - ABZR88_RS03390 0.78 +0.3 810,209 - ABZR88_RS03390 0.78 -0.6 810,212 + ABZR88_RS03390 0.79 +1.0 810,442 - +4.1 810,518 + -0.5 810,588 + ABZR88_RS03395 0.13 +0.0 810,782 + ABZR88_RS03395 0.21 +1.3 810,790 + ABZR88_RS03395 0.22 -0.9 810,876 + ABZR88_RS03395 0.26 +3.4 810,947 + ABZR88_RS03395 0.29 +0.8 811,151 - ABZR88_RS03395 0.38 -0.8 811,200 + ABZR88_RS03395 0.40 -0.1 811,231 + ABZR88_RS03395 0.42 +1.8 811,294 - ABZR88_RS03395 0.44 +0.1
Or see this region's nucleotide sequence