Experiment: Melibiose (C); 6 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS03320 and ABZR88_RS03325 are separated by 457 nucleotides ABZR88_RS03325 and ABZR88_RS03330 are separated by 72 nucleotides ABZR88_RS03330 and ABZR88_RS03335 are separated by 27 nucleotides ABZR88_RS03335 and ABZR88_RS03340 are separated by 173 nucleotides
ABZR88_RS03320: ABZR88_RS03320 - terminase small subunit, at 801,696 to 802,142
_RS03320
ABZR88_RS03325: ABZR88_RS03325 - hypothetical protein, at 802,600 to 802,782
_RS03325
ABZR88_RS03330: ABZR88_RS03330 - hypothetical protein, at 802,855 to 803,271
_RS03330
ABZR88_RS03335: ABZR88_RS03335 - hypothetical protein, at 803,299 to 803,490
_RS03335
ABZR88_RS03340: ABZR88_RS03340 - S24 family peptidase, at 803,664 to 804,365
_RS03340
Position (kb) 802
803
804 Strain fitness (log2 ratio) -1
0
1 at 802.493 kb on + strand at 802.500 kb on + strand at 802.520 kb on + strand at 802.547 kb on + strand at 802.600 kb on - strand at 803.157 kb on + strand, within ABZR88_RS03330 at 803.223 kb on + strand, within ABZR88_RS03330 at 803.266 kb on + strand at 803.267 kb on - strand at 803.486 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Melibiose (C); 6 days remove 802,493 + +0.4 802,500 + -0.8 802,520 + +1.0 802,547 + -0.8 802,600 - -0.1 803,157 + ABZR88_RS03330 0.72 -0.4 803,223 + ABZR88_RS03330 0.88 -0.6 803,266 + -0.0 803,267 - +0.9 803,486 + +1.3
Or see this region's nucleotide sequence