Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS09165

Experiment: D-Cellobiose (C); 3 days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS09155 and ABZR88_RS09160 are separated by 81 nucleotidesABZR88_RS09160 and ABZR88_RS09165 are separated by 58 nucleotidesABZR88_RS09165 and ABZR88_RS09170 are separated by 32 nucleotides ABZR88_RS09155: ABZR88_RS09155 - OmpA family protein, at 2,302,856 to 2,304,241 _RS09155 ABZR88_RS09160: ABZR88_RS09160 - SRPBCC domain-containing protein, at 2,304,323 to 2,304,703 _RS09160 ABZR88_RS09165: ABZR88_RS09165 - bifunctional nuclease family protein, at 2,304,762 to 2,305,361 _RS09165 ABZR88_RS09170: ABZR88_RS09170 - electron transfer flavoprotein subunit alpha/FixB family protein, at 2,305,394 to 2,306,371 _RS09170 Position (kb) 2304 2305 2306Strain fitness (log2 ratio) -2 -1 0 1at 2303.911 kb on - strand, within ABZR88_RS09155at 2304.068 kb on - strand, within ABZR88_RS09155at 2304.118 kb on - strandat 2304.152 kb on - strandat 2304.258 kb on + strandat 2304.299 kb on - strandat 2304.410 kb on - strand, within ABZR88_RS09160at 2304.419 kb on + strand, within ABZR88_RS09160at 2304.828 kb on - strand, within ABZR88_RS09165at 2304.828 kb on - strand, within ABZR88_RS09165at 2304.960 kb on + strand, within ABZR88_RS09165at 2304.978 kb on + strand, within ABZR88_RS09165at 2304.978 kb on + strand, within ABZR88_RS09165at 2304.979 kb on - strand, within ABZR88_RS09165at 2304.991 kb on + strand, within ABZR88_RS09165at 2305.002 kb on - strand, within ABZR88_RS09165at 2305.033 kb on - strand, within ABZR88_RS09165at 2305.145 kb on + strand, within ABZR88_RS09165at 2305.150 kb on + strand, within ABZR88_RS09165at 2305.219 kb on - strand, within ABZR88_RS09165at 2305.583 kb on - strand, within ABZR88_RS09170at 2305.584 kb on + strand, within ABZR88_RS09170at 2305.604 kb on + strand, within ABZR88_RS09170at 2305.987 kb on + strand, within ABZR88_RS09170at 2305.988 kb on - strand, within ABZR88_RS09170at 2305.988 kb on - strand, within ABZR88_RS09170at 2306.183 kb on + strand, within ABZR88_RS09170at 2306.209 kb on - strand, within ABZR88_RS09170at 2306.209 kb on - strand, within ABZR88_RS09170at 2306.251 kb on + strand, within ABZR88_RS09170at 2306.353 kb on + strandat 2306.357 kb on + strandat 2306.358 kb on - strandat 2306.358 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Cellobiose (C); 3 days
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2,303,911 - ABZR88_RS09155 0.76 -0.1
2,304,068 - ABZR88_RS09155 0.87 +0.9
2,304,118 - +0.3
2,304,152 - +0.3
2,304,258 + -0.3
2,304,299 - +0.1
2,304,410 - ABZR88_RS09160 0.23 -1.4
2,304,419 + ABZR88_RS09160 0.25 +0.2
2,304,828 - ABZR88_RS09165 0.11 +0.1
2,304,828 - ABZR88_RS09165 0.11 +0.6
2,304,960 + ABZR88_RS09165 0.33 +0.8
2,304,978 + ABZR88_RS09165 0.36 +0.5
2,304,978 + ABZR88_RS09165 0.36 +1.0
2,304,979 - ABZR88_RS09165 0.36 +0.6
2,304,991 + ABZR88_RS09165 0.38 +0.8
2,305,002 - ABZR88_RS09165 0.40 +0.1
2,305,033 - ABZR88_RS09165 0.45 +0.7
2,305,145 + ABZR88_RS09165 0.64 +1.1
2,305,150 + ABZR88_RS09165 0.65 +0.2
2,305,219 - ABZR88_RS09165 0.76 +0.5
2,305,583 - ABZR88_RS09170 0.19 -2.0
2,305,584 + ABZR88_RS09170 0.19 +0.8
2,305,604 + ABZR88_RS09170 0.21 +0.7
2,305,987 + ABZR88_RS09170 0.61 +1.0
2,305,988 - ABZR88_RS09170 0.61 -2.1
2,305,988 - ABZR88_RS09170 0.61 -1.4
2,306,183 + ABZR88_RS09170 0.81 +0.5
2,306,209 - ABZR88_RS09170 0.83 -1.5
2,306,209 - ABZR88_RS09170 0.83 -1.1
2,306,251 + ABZR88_RS09170 0.88 +1.2
2,306,353 + +1.1
2,306,357 + +0.7
2,306,358 - -1.2
2,306,358 - -0.7

Or see this region's nucleotide sequence