Experiment: D-Cellobiose (C); 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS06805 and ABZR88_RS06810 are separated by 96 nucleotides ABZR88_RS06810 and ABZR88_RS06815 are separated by 102 nucleotides ABZR88_RS06815 and ABZR88_RS06820 are separated by 192 nucleotides ABZR88_RS06820 and ABZR88_RS06825 are separated by 6 nucleotides
ABZR88_RS06805: ABZR88_RS06805 - C40 family peptidase, at 1,668,433 to 1,669,194
_RS06805
ABZR88_RS06810: ABZR88_RS06810 - 4Fe-4S dicluster domain-containing protein, at 1,669,291 to 1,669,644
_RS06810
ABZR88_RS06815: ABZR88_RS06815 - acyl-CoA reductase, at 1,669,747 to 1,670,772
_RS06815
ABZR88_RS06820: ABZR88_RS06820 - fructose-6-phosphate aldolase, at 1,670,965 to 1,671,168
_RS06820
ABZR88_RS06825: ABZR88_RS06825 - cell division ATP-binding protein FtsE, at 1,671,175 to 1,671,855
_RS06825
Position (kb)
1669
1670
1671 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1668.796 kb on - strand, within ABZR88_RS06805 at 1668.855 kb on + strand, within ABZR88_RS06805 at 1668.905 kb on + strand, within ABZR88_RS06805 at 1668.907 kb on + strand, within ABZR88_RS06805 at 1668.957 kb on + strand, within ABZR88_RS06805 at 1668.990 kb on - strand, within ABZR88_RS06805 at 1669.215 kb on - strand at 1669.218 kb on - strand at 1669.687 kb on - strand at 1669.774 kb on - strand at 1669.853 kb on + strand, within ABZR88_RS06815 at 1669.905 kb on - strand, within ABZR88_RS06815 at 1670.104 kb on + strand, within ABZR88_RS06815 at 1670.212 kb on - strand, within ABZR88_RS06815 at 1670.369 kb on + strand, within ABZR88_RS06815 at 1670.434 kb on - strand, within ABZR88_RS06815 at 1670.466 kb on + strand, within ABZR88_RS06815 at 1670.642 kb on + strand, within ABZR88_RS06815 at 1670.845 kb on - strand at 1670.870 kb on + strand at 1670.880 kb on + strand at 1670.939 kb on + strand at 1670.961 kb on - strand at 1671.187 kb on - strand at 1671.195 kb on - strand at 1671.259 kb on - strand, within ABZR88_RS06825 at 1671.265 kb on - strand, within ABZR88_RS06825 at 1671.312 kb on + strand, within ABZR88_RS06825 at 1671.407 kb on + strand, within ABZR88_RS06825 at 1671.495 kb on - strand, within ABZR88_RS06825 at 1671.541 kb on - strand, within ABZR88_RS06825 at 1671.719 kb on + strand, within ABZR88_RS06825 at 1671.719 kb on + strand, within ABZR88_RS06825
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C); 3 days remove 1,668,796 - ABZR88_RS06805 0.48 +1.8 1,668,855 + ABZR88_RS06805 0.55 +3.0 1,668,905 + ABZR88_RS06805 0.62 +1.5 1,668,907 + ABZR88_RS06805 0.62 +1.4 1,668,957 + ABZR88_RS06805 0.69 +1.2 1,668,990 - ABZR88_RS06805 0.73 +2.5 1,669,215 - -1.3 1,669,218 - -0.3 1,669,687 - -0.0 1,669,774 - +0.4 1,669,853 + ABZR88_RS06815 0.10 +1.1 1,669,905 - ABZR88_RS06815 0.15 +1.8 1,670,104 + ABZR88_RS06815 0.35 +0.9 1,670,212 - ABZR88_RS06815 0.45 +0.9 1,670,369 + ABZR88_RS06815 0.61 +1.0 1,670,434 - ABZR88_RS06815 0.67 +1.4 1,670,466 + ABZR88_RS06815 0.70 +0.8 1,670,642 + ABZR88_RS06815 0.87 +1.9 1,670,845 - +0.1 1,670,870 + +1.2 1,670,880 + -0.0 1,670,939 + -0.1 1,670,961 - -1.9 1,671,187 - -1.1 1,671,195 - +0.2 1,671,259 - ABZR88_RS06825 0.12 -1.4 1,671,265 - ABZR88_RS06825 0.13 -1.7 1,671,312 + ABZR88_RS06825 0.20 -1.4 1,671,407 + ABZR88_RS06825 0.34 -1.5 1,671,495 - ABZR88_RS06825 0.47 -0.6 1,671,541 - ABZR88_RS06825 0.54 +0.4 1,671,719 + ABZR88_RS06825 0.80 -2.6 1,671,719 + ABZR88_RS06825 0.80 -1.2
Or see this region's nucleotide sequence