Strain Fitness in Bosea sp. OAE506 around ABIE41_RS17745
Experiment: Ying_AminoAcid20 rep C; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_AminoAcid20 rep C; time point 3 |
---|---|---|---|---|---|
remove | |||||
3,654,962 | - | ABIE41_RS17740 | 0.23 | -0.6 | |
3,654,962 | - | ABIE41_RS17740 | 0.23 | -0.9 | |
3,654,962 | - | ABIE41_RS17740 | 0.23 | +0.1 | |
3,655,326 | - | ABIE41_RS17740 | 0.64 | -0.5 | |
3,655,680 | - | -2.7 | |||
3,656,095 | - | ABIE41_RS17745 | 0.24 | -3.1 | |
3,656,156 | + | ABIE41_RS17745 | 0.28 | -1.3 | |
3,656,156 | + | ABIE41_RS17745 | 0.28 | -1.7 | |
3,656,249 | + | ABIE41_RS17745 | 0.35 | -1.9 | |
3,656,249 | + | ABIE41_RS17745 | 0.35 | -1.7 | |
3,656,249 | + | ABIE41_RS17745 | 0.35 | -1.7 | |
3,656,249 | + | ABIE41_RS17745 | 0.35 | -1.3 | |
3,656,259 | - | ABIE41_RS17745 | 0.36 | -1.3 | |
3,656,587 | - | ABIE41_RS17745 | 0.60 | -2.4 | |
3,656,733 | + | ABIE41_RS17745 | 0.70 | -1.9 | |
3,657,019 | + | -2.5 | |||
3,657,019 | + | -2.6 | |||
3,657,019 | + | -1.3 | |||
3,657,020 | - | -3.4 | |||
3,657,020 | - | -2.4 |
Or see this region's nucleotide sequence