Strain Fitness in Bosea sp. OAE506 around ABIE41_RS13610

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,794,350	-		ABIE41_RS13600	0.72	-0.6
2,794,444	+		ABIE41_RS13600	0.85	+0.6
2,795,211	-				-0.4
2,795,211	-				+1.0
2,795,362	-				-0.7
2,795,397	+				-0.7
2,795,397	+				-0.4
2,795,397	+				-0.9
2,795,397	+				-0.5
2,795,398	-				-0.9
2,795,406	+				-0.7
2,795,406	+				-0.7
2,795,559	+		ABIE41_RS13610	0.19	-0.7
2,795,559	+		ABIE41_RS13610	0.19	-0.5
2,795,560	-		ABIE41_RS13610	0.19	-0.5
2,795,566	-		ABIE41_RS13610	0.20	-0.3
2,795,566	-		ABIE41_RS13610	0.20	-0.4
2,795,566	-		ABIE41_RS13610	0.20	-1.3
2,795,574	+		ABIE41_RS13610	0.20	-0.7
2,795,574	+		ABIE41_RS13610	0.20	+2.0
2,795,883	+		ABIE41_RS13610	0.48	-0.6
2,795,883	+		ABIE41_RS13610	0.48	-0.8
2,795,884	-		ABIE41_RS13610	0.48	-0.9
2,795,884	-		ABIE41_RS13610	0.48	-1.4
2,795,884	-		ABIE41_RS13610	0.48	-0.8
2,795,884	-		ABIE41_RS13610	0.48	-0.6
2,795,884	-		ABIE41_RS13610	0.48	-1.4
2,795,884	-		ABIE41_RS13610	0.48	+0.6
2,795,949	+		ABIE41_RS13610	0.54	-0.6
2,795,949	+		ABIE41_RS13610	0.54	-1.9
2,795,950	-		ABIE41_RS13610	0.54	-0.7
2,795,950	-		ABIE41_RS13610	0.54	-0.2
2,796,006	+		ABIE41_RS13610	0.59	-0.7
2,796,132	+		ABIE41_RS13610	0.70	-0.3
2,796,132	+		ABIE41_RS13610	0.70	+0.0
2,796,133	-		ABIE41_RS13610	0.70	-1.0
2,796,673	+		ABIE41_RS13615	0.21	-0.1
2,796,703	+		ABIE41_RS13615	0.29	-0.2
2,796,704	-		ABIE41_RS13615	0.29	-0.6
2,796,755	-		ABIE41_RS13615	0.43	-0.6
2,796,757	+		ABIE41_RS13615	0.43	-0.7
2,796,758	-		ABIE41_RS13615	0.44	+0.8
2,796,758	-		ABIE41_RS13615	0.44	-0.1
2,796,832	+		ABIE41_RS13615	0.63	-0.4
2,796,832	+		ABIE41_RS13615	0.63	-0.1
2,796,832	+		ABIE41_RS13615	0.63	-0.4
2,796,832	+		ABIE41_RS13615	0.63	+0.1
2,796,833	-		ABIE41_RS13615	0.64	+1.0
2,796,833	-		ABIE41_RS13615	0.64	-0.2
2,796,952	+				-0.2
2,796,953	-				+2.0
2,796,993	-				-0.2
2,797,070	+		ABIE41_RS13620	0.13	-1.3
2,797,070	+		ABIE41_RS13620	0.13	-0.4
2,797,228	-		ABIE41_RS13620	0.34	-0.9
2,797,228	-		ABIE41_RS13620	0.34	-0.2