Strain Fitness in Bosea sp. OAE506 around ABIE41_RS05635

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,155,963	+		ABIE41_RS05630	0.62	-1.2
1,155,963	+		ABIE41_RS05630	0.62	-1.5
1,155,963	+		ABIE41_RS05630	0.62	+0.1
1,155,964	-		ABIE41_RS05630	0.62	-0.5
1,155,964	-		ABIE41_RS05630	0.62	-0.5
1,155,964	-		ABIE41_RS05630	0.62	-2.7
1,155,999	+		ABIE41_RS05630	0.66	-1.5
1,155,999	+		ABIE41_RS05630	0.66	-2.4
1,156,000	-		ABIE41_RS05630	0.66	-0.5
1,156,000	-		ABIE41_RS05630	0.66	-0.9
1,156,000	-		ABIE41_RS05630	0.66	-2.4
1,156,407	+				-0.0
1,156,407	+				-0.6
1,156,407	+				-0.2
1,156,407	+				-0.8
1,156,408	-				+0.3
1,156,408	-				+0.7
1,156,408	-				+0.4
1,156,472	+				+0.1
1,156,472	+				+1.1
1,156,473	-				-1.7
1,156,473	-				+0.5
1,156,473	-				-0.2
1,156,473	-				-0.6
1,156,473	-				-0.4
1,156,473	-				-0.1
1,156,474	+				+1.1
1,156,474	+				+0.1
1,156,475	-				-0.9
1,156,475	-				-0.4
1,156,475	-				-0.4
1,156,475	-				+0.1
1,156,475	-				-0.9
1,156,500	-				-0.5
1,156,715	-		ABIE41_RS05635	0.19	+0.5
1,156,715	-		ABIE41_RS05635	0.19	-0.4
1,156,870	+		ABIE41_RS05635	0.34	+0.4
1,156,870	+		ABIE41_RS05635	0.34	-0.7
1,157,002	+		ABIE41_RS05635	0.47	-0.7
1,157,003	-		ABIE41_RS05635	0.47	+0.7
1,157,571	+				-0.5
1,157,572	-				+0.7
1,157,572	-				+0.8
1,157,572	-				-0.3
1,157,572	-				-1.5
1,157,573	+				-1.2
1,157,573	+				+1.5
1,157,574	-				+0.5
1,157,574	-				-2.1