Strain Fitness in Bosea sp. OAE506 around ABIE41_RS05465

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,129,364	+				-0.2
1,129,364	+				-1.4
1,129,364	+				-0.2
1,129,364	+				+0.3
1,129,365	-				+0.3
1,129,365	-				+0.3
1,129,413	-		ABIE41_RS05465	0.15	+0.0
1,129,413	-		ABIE41_RS05465	0.15	+0.1
1,129,475	+		ABIE41_RS05465	0.24	+1.7
1,129,475	+		ABIE41_RS05465	0.24	-0.3
1,129,475	+		ABIE41_RS05465	0.24	-0.3
1,129,475	+		ABIE41_RS05465	0.24	+0.8
1,129,475	+		ABIE41_RS05465	0.24	-0.8
1,129,475	+		ABIE41_RS05465	0.24	-0.3
1,129,475	+		ABIE41_RS05465	0.24	+0.5
1,129,475	+		ABIE41_RS05465	0.24	+0.1
1,129,476	-		ABIE41_RS05465	0.24	-0.3
1,129,476	-		ABIE41_RS05465	0.24	+0.1
1,129,476	-		ABIE41_RS05465	0.24	+0.5
1,129,476	-		ABIE41_RS05465	0.24	-0.1
1,129,476	-		ABIE41_RS05465	0.24	-0.6
1,129,476	-		ABIE41_RS05465	0.24	-0.3
1,129,592	+		ABIE41_RS05465	0.39	+0.4
1,129,592	+		ABIE41_RS05465	0.39	-0.2
1,129,593	-		ABIE41_RS05465	0.39	+0.6
1,129,892	+		ABIE41_RS05465	0.79	+0.3
1,129,892	+		ABIE41_RS05465	0.79	+0.3
1,129,892	+		ABIE41_RS05465	0.79	+0.3
1,129,892	+		ABIE41_RS05465	0.79	+1.4
1,129,893	-		ABIE41_RS05465	0.79	-0.5
1,129,893	-		ABIE41_RS05465	0.79	+0.2
1,129,893	-		ABIE41_RS05465	0.79	+0.2
1,129,893	-		ABIE41_RS05465	0.79	+0.1
1,129,893	-		ABIE41_RS05465	0.79	+0.2
1,129,893	-		ABIE41_RS05465	0.79	+0.3
1,129,893	-		ABIE41_RS05465	0.79	-0.9
1,129,893	-		ABIE41_RS05465	0.79	-0.2
1,129,893	-		ABIE41_RS05465	0.79	-0.3
1,129,893	-		ABIE41_RS05465	0.79	+0.8
1,129,893	-		ABIE41_RS05465	0.79	-0.1
1,130,002	+				+0.6
1,130,057	+				+0.2
1,130,058	-				-0.5
1,130,149	+				-0.7
1,130,149	+				+1.8
1,130,150	-				-1.0
1,130,150	-				+0.4
1,130,150	-				-0.1
1,130,150	-				+1.6
1,130,150	-				-1.1
1,130,150	-				+1.1
1,130,543	+		ABIE41_RS05470	0.24	+0.3
1,130,543	+		ABIE41_RS05470	0.24	+0.3
1,130,543	+		ABIE41_RS05470	0.24	+0.0
1,130,543	+		ABIE41_RS05470	0.24	-0.1
1,130,543	+		ABIE41_RS05470	0.24	+0.3
1,130,544	-		ABIE41_RS05470	0.24	-0.0
1,130,544	-		ABIE41_RS05470	0.24	+0.1
1,130,544	-		ABIE41_RS05470	0.24	+0.4
1,130,544	-		ABIE41_RS05470	0.24	-0.4
1,130,544	-		ABIE41_RS05470	0.24	-0.2
1,130,578	+		ABIE41_RS05470	0.25	-0.2
1,130,578	+		ABIE41_RS05470	0.25	+0.7
1,130,578	+		ABIE41_RS05470	0.25	+0.4
1,130,578	+		ABIE41_RS05470	0.25	+0.0
1,130,579	-		ABIE41_RS05470	0.25	-0.1
1,130,579	-		ABIE41_RS05470	0.25	+0.0
1,130,579	-		ABIE41_RS05470	0.25	+0.0
1,130,579	-		ABIE41_RS05470	0.25	-0.8
1,130,620	+		ABIE41_RS05470	0.27	-0.5
1,130,620	+		ABIE41_RS05470	0.27	+0.5
1,130,620	+		ABIE41_RS05470	0.27	+0.5
1,130,621	-		ABIE41_RS05470	0.27	-0.1
1,130,621	-		ABIE41_RS05470	0.27	+0.1
1,130,621	-		ABIE41_RS05470	0.27	-0.0
1,130,621	-		ABIE41_RS05470	0.27	+0.8
1,130,621	-		ABIE41_RS05470	0.27	-0.5
1,130,621	-		ABIE41_RS05470	0.27	+0.9
1,130,621	-		ABIE41_RS05470	0.27	-0.5
1,130,621	-		ABIE41_RS05470	0.27	+0.4
1,130,729	-		ABIE41_RS05470	0.32	-0.1
1,130,729	-		ABIE41_RS05470	0.32	-0.1
1,130,729	-		ABIE41_RS05470	0.32	+0.1
1,130,944	+		ABIE41_RS05470	0.43	-0.3
1,130,944	+		ABIE41_RS05470	0.43	+0.0
1,130,944	+		ABIE41_RS05470	0.43	+0.7
1,130,944	+		ABIE41_RS05470	0.43	+0.2
1,130,944	+		ABIE41_RS05470	0.43	+0.1
1,130,944	+		ABIE41_RS05470	0.43	-2.4
1,130,945	-		ABIE41_RS05470	0.43	+0.3
1,130,945	-		ABIE41_RS05470	0.43	+0.5