Strain Fitness in Bosea sp. OAE506 around ABIE41_RS22395

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
4,610,378	+		ABIE41_RS22390	0.72	-1.6
4,610,379	-		ABIE41_RS22390	0.72	-1.1
4,610,379	-		ABIE41_RS22390	0.72	-0.6
4,610,449	+		ABIE41_RS22390	0.75	-0.4
4,610,568	-		ABIE41_RS22390	0.79	+0.9
4,610,639	+		ABIE41_RS22390	0.82	+0.4
4,610,639	+		ABIE41_RS22390	0.82	-0.1
4,610,640	-		ABIE41_RS22390	0.82	-3.8
4,610,640	-		ABIE41_RS22390	0.82	-0.1
4,610,640	-		ABIE41_RS22390	0.82	-1.9
4,610,640	-		ABIE41_RS22390	0.82	-2.6
4,610,696	+		ABIE41_RS22390	0.84	+1.5
4,610,697	-		ABIE41_RS22390	0.84	-1.4
4,610,697	-		ABIE41_RS22390	0.84	-1.1
4,610,718	-		ABIE41_RS22390	0.85	-1.6
4,610,964	-				-2.9
4,610,967	-				-2.3
4,610,967	-				-1.1
4,611,110	+				-2.2
4,611,110	+				-3.8
4,611,111	-				-1.9
4,611,579	+		ABIE41_RS22395	0.59	-2.2
4,611,579	+		ABIE41_RS22395	0.59	-0.9
4,611,579	+		ABIE41_RS22395	0.59	+0.1
4,611,580	-		ABIE41_RS22395	0.59	-0.7
4,611,790	-				+0.0
4,611,790	-				-1.4
4,611,835	+				+0.6
4,611,836	-				+0.1
4,611,836	-				+0.0
4,611,952	+				+0.3
4,611,952	+				-0.4
4,611,952	+				+0.0
4,611,952	+				+1.1
4,611,953	-				-0.1
4,611,953	-				-0.2
4,611,953	-				-0.1
4,611,953	-				-0.4
4,611,953	-				+0.5
4,611,953	-				-0.2
4,611,953	-				-0.5
4,611,953	-				+0.4
4,611,956	+				+0.1
4,611,956	+				+0.3
4,611,956	+				-1.0
4,611,956	+				-0.0
4,611,956	+				-0.4
4,611,956	+				+0.1
4,611,956	+				-0.1
4,611,956	+				-0.0
4,611,957	-				+0.3
4,611,957	-				+0.9
4,611,957	-				-0.6
4,611,957	-				+0.3
4,611,957	-				-0.3
4,611,957	-				-0.6
4,611,957	-				-0.4
4,611,957	-				-0.6
4,611,957	-				+0.0
4,611,957	-				+0.3
4,611,957	-				-0.2
4,611,957	-				+0.2
4,611,977	-				+0.5
4,612,171	+				+0.1
4,612,171	+				+0.3
4,612,171	+				+0.7
4,612,172	-				-0.2
4,612,172	-				+0.8
4,612,172	-				+0.7
4,612,172	-				+0.4
4,612,172	-				+1.0
4,612,172	-				-0.3
4,612,172	-				+0.8
4,612,172	-				+0.7
4,612,172	-				-0.2
4,612,172	-				+0.8
4,612,172	-				+0.2
4,612,480	+		ABIE41_RS22400	0.19	+0.9
4,612,481	-		ABIE41_RS22400	0.19	+0.1
4,612,696	+		ABIE41_RS22400	0.29	+0.3
4,612,697	-		ABIE41_RS22400	0.29	+0.8
4,612,697	-		ABIE41_RS22400	0.29	-0.1
4,612,711	+		ABIE41_RS22400	0.29	+0.5
4,612,711	+		ABIE41_RS22400	0.29	+0.7
4,612,711	+		ABIE41_RS22400	0.29	+0.9
4,612,712	-		ABIE41_RS22400	0.29	+1.4
4,612,712	-		ABIE41_RS22400	0.29	+0.5
4,612,712	-		ABIE41_RS22400	0.29	-0.4
4,612,712	-		ABIE41_RS22400	0.29	+0.5
4,612,712	-		ABIE41_RS22400	0.29	+0.1
4,612,712	-		ABIE41_RS22400	0.29	+0.5
4,612,712	-		ABIE41_RS22400	0.29	+0.5
4,612,713	+		ABIE41_RS22400	0.29	+0.1
4,612,754	-		ABIE41_RS22400	0.31	-2.2
4,612,754	-		ABIE41_RS22400	0.31	+1.1
4,612,756	+		ABIE41_RS22400	0.31	-0.4
4,612,757	-		ABIE41_RS22400	0.31	+0.1
4,612,757	-		ABIE41_RS22400	0.31	+1.5
4,612,757	-		ABIE41_RS22400	0.31	+0.5