Strain Fitness in Bosea sp. OAE506 around ABIE41_RS15135

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,090,952	-				+0.8
3,090,952	-				+0.1
3,091,201	-		ABIE41_RS15130	0.37	+0.7
3,091,569	+		ABIE41_RS15130	0.79	+0.7
3,091,777	+				-0.5
3,091,921	+		ABIE41_RS15135	0.17	+0.6
3,091,921	+		ABIE41_RS15135	0.17	+0.9
3,091,921	+		ABIE41_RS15135	0.17	+1.0
3,091,922	-		ABIE41_RS15135	0.17	+0.1
3,091,922	-		ABIE41_RS15135	0.17	+2.5
3,091,985	-		ABIE41_RS15135	0.24	+1.0
3,092,149	+		ABIE41_RS15135	0.43	+0.6
3,092,150	-		ABIE41_RS15135	0.44	+2.0
3,092,248	+		ABIE41_RS15135	0.55	+0.6
3,092,248	+		ABIE41_RS15135	0.55	+0.3
3,092,411	-		ABIE41_RS15135	0.74	+0.4
3,092,425	+		ABIE41_RS15135	0.76	+0.7
3,092,663	+				+2.3
3,092,684	-				-0.9
3,092,684	-				+0.2
3,092,684	-				-0.0
3,092,725	-				-0.0
3,092,877	+				-0.4
3,092,980	+				+0.3
3,092,980	+				+0.2
3,092,981	-				+0.8
3,093,368	-		ABIE41_RS15140	0.27	+1.4
3,093,383	-		ABIE41_RS15140	0.28	-0.2
3,093,396	-		ABIE41_RS15140	0.29	-1.0