Strain Fitness in Bosea sp. OAE506 around ABIE41_RS12665

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,598,125	+		ABIE41_RS12660	0.71	-1.1
2,598,181	-		ABIE41_RS12660	0.73	-0.2
2,598,297	+		ABIE41_RS12660	0.78	-0.2
2,598,367	-		ABIE41_RS12660	0.82	-1.8
2,598,367	-		ABIE41_RS12660	0.82	+0.4
2,598,421	-		ABIE41_RS12660	0.84	-0.1
2,598,421	-		ABIE41_RS12660	0.84	+0.6
2,598,435	+		ABIE41_RS12660	0.85	+0.2
2,598,435	+		ABIE41_RS12660	0.85	-0.1
2,598,486	+		ABIE41_RS12660	0.87	+0.3
2,598,487	-		ABIE41_RS12660	0.87	-0.9
2,598,507	+		ABIE41_RS12660	0.88	-0.2
2,598,546	+		ABIE41_RS12660	0.90	+0.2
2,598,547	-		ABIE41_RS12660	0.90	+0.4
2,598,547	-		ABIE41_RS12660	0.90	+0.5
2,598,547	-		ABIE41_RS12660	0.90	-0.7
2,598,868	+				-0.4
2,598,868	+				-0.2
2,598,868	+				-0.1
2,598,869	-				-0.1
2,599,369	+		ABIE41_RS12665	0.46	+0.1
2,599,369	+		ABIE41_RS12665	0.46	+0.0
2,599,369	+		ABIE41_RS12665	0.46	-0.1
2,599,369	+		ABIE41_RS12665	0.46	+0.1
2,599,369	+		ABIE41_RS12665	0.46	-0.3
2,599,370	-		ABIE41_RS12665	0.46	+0.0
2,599,370	-		ABIE41_RS12665	0.46	+0.2
2,599,522	+		ABIE41_RS12665	0.65	-0.5
2,599,523	-		ABIE41_RS12665	0.65	+0.4
2,599,907	+				-0.0
2,599,908	-				-1.3