Strain Fitness in Bosea sp. OAE506 around ABIE41_RS19435

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
4,003,531	+		ABIE41_RS19425	0.66	+1.5
4,003,531	+		ABIE41_RS19425	0.66	+1.2
4,003,532	-		ABIE41_RS19425	0.66	+1.2
4,003,533	+		ABIE41_RS19425	0.66	+1.6
4,003,533	+		ABIE41_RS19425	0.66	+1.0
4,003,533	+		ABIE41_RS19425	0.66	+0.1
4,003,533	+		ABIE41_RS19425	0.66	+0.1
4,003,533	+		ABIE41_RS19425	0.66	+1.7
4,003,533	+		ABIE41_RS19425	0.66	+0.9
4,003,533	+		ABIE41_RS19425	0.66	+1.5
4,003,533	+		ABIE41_RS19425	0.66	+1.2
4,003,533	+		ABIE41_RS19425	0.66	+2.1
4,003,533	+		ABIE41_RS19425	0.66	-0.5
4,003,534	-		ABIE41_RS19425	0.66	+2.5
4,003,534	-		ABIE41_RS19425	0.66	+1.2
4,003,534	-		ABIE41_RS19425	0.66	+0.7
4,003,534	-		ABIE41_RS19425	0.66	+0.7
4,003,534	-		ABIE41_RS19425	0.66	+1.3
4,003,611	+		ABIE41_RS19425	0.74	+0.5
4,003,612	-		ABIE41_RS19425	0.74	+1.2
4,003,612	-		ABIE41_RS19425	0.74	+1.5
4,003,612	-		ABIE41_RS19425	0.74	+1.0
4,003,612	-		ABIE41_RS19425	0.74	+0.7
4,003,644	+		ABIE41_RS19425	0.78	+0.8
4,003,644	+		ABIE41_RS19425	0.78	+1.6
4,003,645	-		ABIE41_RS19425	0.78	+0.7
4,003,763	+				+0.8
4,004,087	+		ABIE41_RS19430	0.31	+1.0
4,004,087	+		ABIE41_RS19430	0.31	+1.0
4,004,088	-		ABIE41_RS19430	0.31	-2.3
4,004,187	+		ABIE41_RS19430	0.59	+1.3
4,004,188	-		ABIE41_RS19430	0.59	-1.8
4,004,245	-		ABIE41_RS19430	0.75	-0.7
4,004,264	+		ABIE41_RS19430	0.80	+1.3
4,004,265	-		ABIE41_RS19430	0.80	-0.6
4,004,265	-		ABIE41_RS19430	0.80	+1.6
4,004,265	-		ABIE41_RS19430	0.80	+0.1
4,004,378	+				+2.4
4,004,716	+				+1.2
4,004,716	+				+1.1
4,004,716	+				+0.6
4,004,717	-				+0.4
4,004,717	-				-0.9
4,004,717	-				-0.5
4,004,739	+				+1.3
4,004,739	+				+1.1
4,004,739	+				+2.2
4,004,828	+				+1.6
4,004,828	+				+0.8
4,004,828	+				+1.1
4,004,828	+				+1.2
4,004,828	+				+1.0
4,004,829	-				+0.7
4,004,829	-				+1.1
4,004,829	-				+1.0
4,005,013	+		ABIE41_RS19440	0.40	+1.1
4,005,013	+		ABIE41_RS19440	0.40	+1.2
4,005,014	-		ABIE41_RS19440	0.40	-0.4
4,005,016	+		ABIE41_RS19440	0.41	+1.3
4,005,047	+		ABIE41_RS19440	0.49	+0.9
4,005,047	+		ABIE41_RS19440	0.49	+1.9
4,005,048	-		ABIE41_RS19440	0.50	+1.1
4,005,061	+		ABIE41_RS19440	0.53	+1.9
4,005,066	+		ABIE41_RS19440	0.55	+2.0
4,005,067	-		ABIE41_RS19440	0.55	+2.1
4,005,126	+		ABIE41_RS19440	0.72	+1.3
4,005,175	+		ABIE41_RS19440	0.86	+1.5
4,005,175	+		ABIE41_RS19440	0.86	+1.2
4,005,175	+		ABIE41_RS19440	0.86	+1.2
4,005,175	+		ABIE41_RS19440	0.86	+2.1
4,005,175	+		ABIE41_RS19440	0.86	+1.1
4,005,175	+		ABIE41_RS19440	0.86	+0.1
4,005,175	+		ABIE41_RS19440	0.86	+0.4
4,005,175	+		ABIE41_RS19440	0.86	+1.7
4,005,175	+		ABIE41_RS19440	0.86	+2.3
4,005,175	+		ABIE41_RS19440	0.86	+0.6
4,005,175	+		ABIE41_RS19440	0.86	+1.5
4,005,175	+		ABIE41_RS19440	0.86	+1.4
4,005,176	-		ABIE41_RS19440	0.86	+0.1
4,005,176	-		ABIE41_RS19440	0.86	+1.0
4,005,176	-		ABIE41_RS19440	0.86	+1.2
4,005,176	-		ABIE41_RS19440	0.86	+1.0
4,005,176	-		ABIE41_RS19440	0.86	+1.1
4,005,176	-		ABIE41_RS19440	0.86	+1.3
4,005,176	-		ABIE41_RS19440	0.86	+0.9
4,005,176	-		ABIE41_RS19440	0.86	+0.9
4,005,176	-		ABIE41_RS19440	0.86	+1.5
4,005,176	-		ABIE41_RS19440	0.86	+1.3
4,005,176	-		ABIE41_RS19440	0.86	+1.0
4,005,176	-		ABIE41_RS19440	0.86	+1.0
4,005,176	-		ABIE41_RS19440	0.86	+1.2
4,005,176	-		ABIE41_RS19440	0.86	+1.0
4,005,176	-		ABIE41_RS19440	0.86	+1.5