Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18045

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
3,714,481	-		ABIE41_RS18030	0.34	+0.5
3,714,481	-		ABIE41_RS18030	0.34	+1.1
3,714,537	-		ABIE41_RS18030	0.48	-1.2
3,714,537	-		ABIE41_RS18030	0.48	+0.1
3,714,537	-		ABIE41_RS18030	0.48	-0.2
3,714,537	-		ABIE41_RS18030	0.48	-0.9
3,714,537	-		ABIE41_RS18030	0.48	+0.1
3,714,537	-		ABIE41_RS18030	0.48	-0.1
3,714,818	+				-0.9
3,714,819	-				-0.2
3,714,872	-				-0.6
3,715,098	+				+0.2
3,715,099	-				+0.2
3,715,154	+				-0.0
3,715,154	+				+0.6
3,715,154	+				-0.1
3,715,154	+				+0.8
3,715,154	+				-0.8
3,715,155	-				-0.1
3,715,202	+		ABIE41_RS18040	0.43	-1.0
3,715,203	-		ABIE41_RS18040	0.45	-2.6
3,715,407	+				-0.3
3,715,407	+				+1.5
3,715,407	+				-0.2
3,715,407	+				-0.6
3,715,408	-				+0.1
3,715,408	-				-1.2
3,715,408	-				+0.1
3,715,437	+		ABIE41_RS18045	0.10	-0.0
3,716,225	+		ABIE41_RS18045	0.54	+1.0
3,716,225	+		ABIE41_RS18045	0.54	+1.4
3,716,226	-		ABIE41_RS18045	0.54	+0.3
3,716,226	-		ABIE41_RS18045	0.54	-0.5
3,716,421	+		ABIE41_RS18045	0.65	-0.1
3,716,422	-		ABIE41_RS18045	0.65	-0.2
3,716,574	-		ABIE41_RS18045	0.73	+2.0
3,716,825	+		ABIE41_RS18045	0.87	+0.1
3,716,919	-				+0.2
3,716,993	+				+0.8