Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06745

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
1,381,901	+				-2.3
1,382,096	+				-0.7
1,382,096	+				+1.1
1,382,096	+				-0.1
1,382,096	+				+0.1
1,382,097	-				-0.3
1,382,097	-				-0.4
1,382,097	-				+0.3
1,382,097	-				+1.2
1,382,097	-				+0.1
1,382,156	+				-1.2
1,382,156	+				-0.2
1,382,156	+				+0.2
1,382,156	+				+0.2
1,382,157	-				+0.1
1,382,157	-				+0.1
1,382,157	-				-0.0
1,382,157	-				-0.4
1,382,157	-				-0.2
1,382,157	-				+0.6
1,382,175	+				+0.0
1,382,175	+				+1.1
1,382,175	+				+1.1
1,382,175	+				-0.7
1,382,176	-				-0.4
1,382,176	-				-0.1
1,382,176	-				+0.1
1,382,226	+				+0.1
1,382,226	+				+0.2
1,382,226	+				+0.7
1,382,227	-				+0.1
1,382,227	-				-0.5
1,382,227	-				-0.6
1,382,227	-				-0.1
1,382,227	-				-0.7
1,382,247	-				+0.4
1,382,247	-				-0.8
1,382,261	+				-0.5
1,382,264	-				+0.0
1,382,318	+		ABIE41_RS06740	0.19	-1.0
1,382,359	+		ABIE41_RS06740	0.32	-0.5
1,382,370	+		ABIE41_RS06740	0.36	+0.2
1,382,440	+		ABIE41_RS06740	0.58	+0.4
1,382,526	+		ABIE41_RS06740	0.85	-0.2
1,382,527	-		ABIE41_RS06740	0.85	-0.5
1,382,548	-				+0.7
1,382,603	+				+0.3
1,382,713	+				-0.2
1,382,714	-				+0.2
1,382,714	-				+0.6
1,382,739	+				-0.3
1,382,740	-				+0.1
1,382,761	+				-0.3
1,382,761	+				+0.1
1,382,762	-				+1.1
1,382,825	+		ABIE41_RS06745	0.17	-0.7
1,382,826	-		ABIE41_RS06745	0.17	+0.2
1,382,847	+		ABIE41_RS06745	0.27	-0.5
1,382,938	+		ABIE41_RS06745	0.68	-0.3
1,382,938	+		ABIE41_RS06745	0.68	-0.0
1,382,938	+		ABIE41_RS06745	0.68	-0.1
1,382,948	-		ABIE41_RS06745	0.73	-0.9
1,382,948	-		ABIE41_RS06745	0.73	-0.0
1,383,021	+				-0.4
1,383,021	+				-0.1
1,383,021	+				+0.1
1,383,021	+				-0.3
1,383,022	-				-0.4
1,383,033	+				+0.1
1,383,033	+				+0.6
1,383,034	-				-0.8
1,383,034	-				-0.0
1,383,034	-				+0.2
1,383,034	-				-0.4
1,383,034	-				+0.4
1,383,076	+				+0.1
1,383,077	-				-0.4
1,383,087	+				-0.5
1,383,102	+				-0.4
1,383,102	+				-1.5
1,383,103	-				+1.1
1,383,189	+				-0.2
1,383,189	+				+0.2
1,383,189	+				-0.0
1,383,189	+				-0.1
1,383,189	+				+0.1
1,383,189	+				-0.5
1,383,190	-				+0.2
1,383,190	-				-0.6
1,383,190	-				+0.6
1,383,294	-				-0.3
1,383,425	+				+0.3
1,383,425	+				-0.4
1,383,425	+				-0.2
1,383,425	+				-0.4
1,383,425	+				+0.1
1,383,425	+				-0.3
1,383,425	+				-0.5
1,383,425	+				-0.6
1,383,426	-				-0.2
1,383,426	-				-0.7
1,383,426	-				-0.4
1,383,426	-				+0.2
1,383,627	+		ABIE41_RS06750	0.15	-0.3
1,383,627	+		ABIE41_RS06750	0.15	+0.1
1,383,627	+		ABIE41_RS06750	0.15	+1.1
1,383,627	+		ABIE41_RS06750	0.15	+0.4
1,383,627	+		ABIE41_RS06750	0.15	+0.2
1,383,627	+		ABIE41_RS06750	0.15	+0.3
1,383,627	+		ABIE41_RS06750	0.15	-0.8
1,383,627	+		ABIE41_RS06750	0.15	-0.4
1,383,627	+		ABIE41_RS06750	0.15	+0.0
1,383,627	+		ABIE41_RS06750	0.15	+0.1
1,383,627	+		ABIE41_RS06750	0.15	-0.5
1,383,627	+		ABIE41_RS06750	0.15	-0.3
1,383,628	-		ABIE41_RS06750	0.15	-0.3
1,383,628	-		ABIE41_RS06750	0.15	+0.2
1,383,628	-		ABIE41_RS06750	0.15	+0.7
1,383,628	-		ABIE41_RS06750	0.15	+0.6
1,383,628	-		ABIE41_RS06750	0.15	+0.2
1,383,630	+		ABIE41_RS06750	0.16	-0.5
1,383,630	+		ABIE41_RS06750	0.16	-0.2
1,383,630	+		ABIE41_RS06750	0.16	-0.1
1,383,630	+		ABIE41_RS06750	0.16	+0.5
1,383,630	+		ABIE41_RS06750	0.16	-0.3
1,383,630	+		ABIE41_RS06750	0.16	+0.7
1,383,630	+		ABIE41_RS06750	0.16	-0.5
1,383,630	+		ABIE41_RS06750	0.16	-0.2
1,383,630	+		ABIE41_RS06750	0.16	-0.3
1,383,630	+		ABIE41_RS06750	0.16	+0.7
1,383,631	-		ABIE41_RS06750	0.16	+0.1
1,383,631	-		ABIE41_RS06750	0.16	+0.4
1,383,631	-		ABIE41_RS06750	0.16	+0.7
1,383,631	-		ABIE41_RS06750	0.16	-0.5
1,383,631	-		ABIE41_RS06750	0.16	-0.8
1,383,631	-		ABIE41_RS06750	0.16	-0.9
1,383,699	+		ABIE41_RS06750	0.18	+1.7
1,383,699	+		ABIE41_RS06750	0.18	-0.1
1,383,699	+		ABIE41_RS06750	0.18	+0.3
1,383,699	+		ABIE41_RS06750	0.18	+0.6
1,383,699	+		ABIE41_RS06750	0.18	+0.3
1,383,700	-		ABIE41_RS06750	0.18	+0.2
1,383,700	-		ABIE41_RS06750	0.18	+0.6
1,383,700	-		ABIE41_RS06750	0.18	-0.2
1,383,700	-		ABIE41_RS06750	0.18	+0.1
1,383,700	-		ABIE41_RS06750	0.18	-0.1
1,383,700	-		ABIE41_RS06750	0.18	-0.3
1,383,700	-		ABIE41_RS06750	0.18	+0.1
1,383,744	+		ABIE41_RS06750	0.20	-0.6
1,383,745	-		ABIE41_RS06750	0.20	+0.3
1,383,745	-		ABIE41_RS06750	0.20	-0.1
1,383,745	-		ABIE41_RS06750	0.20	-0.3
1,383,780	-		ABIE41_RS06750	0.21	+0.1
1,383,825	-		ABIE41_RS06750	0.23	-0.2
1,383,825	-		ABIE41_RS06750	0.23	+0.1
1,383,905	+		ABIE41_RS06750	0.26	+0.1
1,383,905	+		ABIE41_RS06750	0.26	+0.1
1,383,906	-		ABIE41_RS06750	0.26	+0.5
1,383,906	-		ABIE41_RS06750	0.26	-0.2
1,383,906	-		ABIE41_RS06750	0.26	-0.9
1,383,906	-		ABIE41_RS06750	0.26	-0.3
1,383,906	-		ABIE41_RS06750	0.26	+0.8