Strain Fitness in Bosea sp. OAE506 around ABIE41_RS08775

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
1,817,391	-		ABIE41_RS08765	0.65	-0.2
1,817,714	+		ABIE41_RS08765	0.83	+0.6
1,817,714	+		ABIE41_RS08765	0.83	+0.3
1,817,714	+		ABIE41_RS08765	0.83	-0.7
1,817,714	+		ABIE41_RS08765	0.83	+0.2
1,817,714	+		ABIE41_RS08765	0.83	-0.4
1,817,715	-		ABIE41_RS08765	0.83	-0.5
1,817,715	-		ABIE41_RS08765	0.83	+0.0
1,817,715	-		ABIE41_RS08765	0.83	+0.0
1,817,715	-		ABIE41_RS08765	0.83	+0.1
1,817,716	+		ABIE41_RS08765	0.83	-0.1
1,817,716	+		ABIE41_RS08765	0.83	-0.7
1,817,716	+		ABIE41_RS08765	0.83	+0.2
1,817,717	-		ABIE41_RS08765	0.84	+0.5
1,817,717	-		ABIE41_RS08765	0.84	-0.1
1,817,828	+		ABIE41_RS08765	0.90	-0.9
1,817,828	+		ABIE41_RS08765	0.90	-0.1
1,817,920	+				+0.3
1,817,920	+				-0.5
1,817,948	+				+0.3
1,817,948	+				-0.5
1,817,948	+				-0.3
1,817,949	-				-0.4
1,817,949	-				+0.9
1,817,949	-				-0.4
1,818,000	-				-0.3
1,818,000	-				+1.3
1,818,000	-				-0.2
1,818,187	+		ABIE41_RS08770	0.63	-0.4
1,818,301	-				-0.0
1,818,301	-				+0.8
1,818,390	+				-0.8
1,818,390	+				-0.7
1,818,390	+				-3.1
1,818,390	+				-1.0
1,818,391	-				-0.3
1,818,513	+		ABIE41_RS08775	0.13	-0.9
1,818,514	-		ABIE41_RS08775	0.14	-1.3
1,818,514	-		ABIE41_RS08775	0.14	-0.6
1,818,517	+		ABIE41_RS08775	0.14	-0.6
1,818,819	+		ABIE41_RS08775	0.33	+0.9
1,818,820	-		ABIE41_RS08775	0.33	-0.3
1,818,976	-		ABIE41_RS08775	0.43	-0.6
1,818,976	-		ABIE41_RS08775	0.43	-2.5
1,819,362	+		ABIE41_RS08775	0.67	-1.2
1,819,362	+		ABIE41_RS08775	0.67	-2.1
1,819,363	-		ABIE41_RS08775	0.67	-0.1
1,819,371	+		ABIE41_RS08775	0.67	-1.2
1,819,372	-		ABIE41_RS08775	0.67	-1.6
1,819,426	+		ABIE41_RS08775	0.71	-0.4
1,820,058	+				-0.5
1,820,859	+		ABIE41_RS08780	0.69	-1.9