Strain Fitness in Bosea sp. OAE506 around ABIE41_RS08725

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
1,805,099	+		ABIE41_RS08715	0.46	-0.4
1,805,183	+		ABIE41_RS08715	0.85	-0.3
1,805,184	-		ABIE41_RS08715	0.85	-0.2
1,805,184	-		ABIE41_RS08715	0.85	-0.2
1,805,213	+				+0.6
1,805,213	+				+0.3
1,805,213	+				+0.1
1,805,213	+				+1.5
1,805,348	-		ABIE41_RS08720	0.13	+0.0
1,805,348	-		ABIE41_RS08720	0.13	-0.8
1,805,426	-		ABIE41_RS08720	0.24	-0.4
1,805,785	+		ABIE41_RS08720	0.74	-1.9
1,805,785	+		ABIE41_RS08720	0.74	-0.7
1,805,786	-		ABIE41_RS08720	0.74	-0.3
1,805,786	-		ABIE41_RS08720	0.74	-0.5
1,805,786	-		ABIE41_RS08720	0.74	-0.7
1,805,787	+		ABIE41_RS08720	0.74	+0.7
1,805,787	+		ABIE41_RS08720	0.74	-0.8
1,805,962	+				-1.0
1,805,962	+				+0.7
1,805,962	+				-2.4
1,805,962	+				-0.7
1,805,962	+				-0.6
1,805,963	-				-0.2
1,805,963	-				-0.2
1,805,963	-				+0.1
1,805,963	-				+0.6
1,806,090	+				-0.1
1,806,091	-				+0.2
1,806,091	-				+0.2
1,806,240	+		ABIE41_RS08725	0.13	-0.5
1,806,241	-		ABIE41_RS08725	0.13	+0.5
1,806,241	-		ABIE41_RS08725	0.13	+0.5
1,806,241	-		ABIE41_RS08725	0.13	+0.1
1,806,291	+		ABIE41_RS08725	0.17	+0.1
1,806,291	+		ABIE41_RS08725	0.17	+0.2
1,806,292	-		ABIE41_RS08725	0.17	+0.0
1,806,292	-		ABIE41_RS08725	0.17	+0.1
1,806,492	+		ABIE41_RS08725	0.34	+0.1
1,806,492	+		ABIE41_RS08725	0.34	-0.5
1,806,492	+		ABIE41_RS08725	0.34	-1.1
1,806,493	-		ABIE41_RS08725	0.34	+0.3
1,806,493	-		ABIE41_RS08725	0.34	-0.8
1,806,550	-		ABIE41_RS08725	0.39	+0.7
1,806,558	+		ABIE41_RS08725	0.39	-0.0
1,806,558	+		ABIE41_RS08725	0.39	+0.6
1,806,558	+		ABIE41_RS08725	0.39	-0.0
1,806,558	+		ABIE41_RS08725	0.39	-0.1
1,806,559	-		ABIE41_RS08725	0.39	-0.2
1,806,559	-		ABIE41_RS08725	0.39	-0.1
1,806,559	-		ABIE41_RS08725	0.39	+0.2
1,806,559	-		ABIE41_RS08725	0.39	+0.0
1,806,561	+		ABIE41_RS08725	0.40	+0.1
1,806,562	-		ABIE41_RS08725	0.40	-0.8
1,806,562	-		ABIE41_RS08725	0.40	+2.9
1,806,562	-		ABIE41_RS08725	0.40	+0.7
1,806,562	-		ABIE41_RS08725	0.40	+0.0
1,806,562	-		ABIE41_RS08725	0.40	+0.7
1,806,972	+		ABIE41_RS08725	0.74	+0.2
1,806,973	-		ABIE41_RS08725	0.74	+0.7
1,807,038	+		ABIE41_RS08725	0.79	-0.4
1,807,038	+		ABIE41_RS08725	0.79	-0.1
1,807,039	-		ABIE41_RS08725	0.80	-0.1
1,807,039	-		ABIE41_RS08725	0.80	-0.0
1,807,039	-		ABIE41_RS08725	0.80	+0.4
1,807,405	-				+0.2
1,807,460	+				+0.4
1,807,460	+				-0.1
1,807,460	+				-0.2
1,807,460	+				-0.3
1,807,461	-				-0.1
1,807,461	-				+0.9
1,807,461	-				+1.5
1,807,754	-		ABIE41_RS08730	0.25	-0.1
1,807,780	+		ABIE41_RS08730	0.28	+0.1
1,807,780	+		ABIE41_RS08730	0.28	-1.1
1,807,780	+		ABIE41_RS08730	0.28	-0.1
1,807,781	-		ABIE41_RS08730	0.28	+0.9
1,807,781	-		ABIE41_RS08730	0.28	-0.3
1,807,781	-		ABIE41_RS08730	0.28	+0.2
1,807,781	-		ABIE41_RS08730	0.28	-0.2
1,807,781	-		ABIE41_RS08730	0.28	+0.3
1,807,781	-		ABIE41_RS08730	0.28	+0.3
1,807,783	+		ABIE41_RS08730	0.28	+1.1
1,807,783	+		ABIE41_RS08730	0.28	-0.2
1,807,831	+		ABIE41_RS08730	0.34	+0.3
1,807,832	-		ABIE41_RS08730	0.34	+0.5
1,807,986	+		ABIE41_RS08730	0.52	-0.1
1,807,986	+		ABIE41_RS08730	0.52	-0.0
1,807,986	+		ABIE41_RS08730	0.52	-1.5
1,807,987	-		ABIE41_RS08730	0.52	-0.0
1,808,023	+		ABIE41_RS08730	0.56	-0.6
1,808,024	-		ABIE41_RS08730	0.56	-0.1
1,808,024	-		ABIE41_RS08730	0.56	+0.0