Strain Fitness in Bosea sp. OAE506 around ABIE41_RS07965

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
1,635,028	+				-0.2
1,635,028	+				+0.5
1,635,029	-				+0.3
1,635,031	+				+0.3
1,635,031	+				-0.0
1,635,031	+				-0.6
1,635,031	+				-0.5
1,635,032	-				+1.1
1,635,032	-				+0.5
1,635,032	-				+0.2
1,635,032	-				-0.4
1,635,114	+		ABIE41_RS07955	0.28	+0.4
1,635,114	+		ABIE41_RS07955	0.28	+0.1
1,635,115	-		ABIE41_RS07955	0.28	-0.0
1,635,271	+		ABIE41_RS07955	0.67	+0.4
1,635,271	+		ABIE41_RS07955	0.67	-2.1
1,635,272	-		ABIE41_RS07955	0.67	+0.2
1,635,272	-		ABIE41_RS07955	0.67	+0.3
1,635,272	-		ABIE41_RS07955	0.67	+0.0
1,635,644	-				+1.7
1,635,665	-				-0.1
1,635,727	+				+0.4
1,635,728	-				+0.4
1,635,728	-				+0.2
1,635,728	-				+0.4
1,635,728	-				-0.1
1,635,728	-				-0.2
1,635,728	-				+0.4
1,635,949	+		ABIE41_RS07965	0.21	+0.5
1,635,949	+		ABIE41_RS07965	0.21	-0.4
1,635,949	+		ABIE41_RS07965	0.21	-0.2
1,635,949	+		ABIE41_RS07965	0.21	-0.2
1,635,949	+		ABIE41_RS07965	0.21	-0.3
1,635,950	-		ABIE41_RS07965	0.21	+0.2
1,635,950	-		ABIE41_RS07965	0.21	+0.4
1,635,950	-		ABIE41_RS07965	0.21	-0.3
1,635,950	-		ABIE41_RS07965	0.21	-0.0
1,635,950	-		ABIE41_RS07965	0.21	+0.1
1,635,950	-		ABIE41_RS07965	0.21	-0.4
1,635,950	-		ABIE41_RS07965	0.21	+0.1
1,635,950	-		ABIE41_RS07965	0.21	-0.1
1,635,950	-		ABIE41_RS07965	0.21	-0.2
1,635,950	-		ABIE41_RS07965	0.21	+0.1
1,635,950	-		ABIE41_RS07965	0.21	+0.1
1,636,108	+		ABIE41_RS07965	0.35	+0.4
1,636,108	+		ABIE41_RS07965	0.35	-0.1
1,636,109	-		ABIE41_RS07965	0.35	+1.0
1,636,196	+		ABIE41_RS07965	0.42	-0.5
1,636,196	+		ABIE41_RS07965	0.42	-0.7
1,636,196	+		ABIE41_RS07965	0.42	-0.2
1,636,197	-		ABIE41_RS07965	0.42	+0.2
1,636,197	-		ABIE41_RS07965	0.42	+0.1
1,636,197	-		ABIE41_RS07965	0.42	+0.1
1,636,197	-		ABIE41_RS07965	0.42	-1.3
1,636,197	-		ABIE41_RS07965	0.42	+0.5
1,636,198	+		ABIE41_RS07965	0.42	+0.2
1,636,198	+		ABIE41_RS07965	0.42	-0.4
1,636,198	+		ABIE41_RS07965	0.42	+0.0
1,636,198	+		ABIE41_RS07965	0.42	-0.6
1,636,198	+		ABIE41_RS07965	0.42	-0.6
1,636,198	+		ABIE41_RS07965	0.42	+0.2
1,636,199	-		ABIE41_RS07965	0.42	-0.0
1,636,199	-		ABIE41_RS07965	0.42	-0.5
1,636,199	-		ABIE41_RS07965	0.42	-0.8
1,636,199	-		ABIE41_RS07965	0.42	-0.0
1,636,240	+		ABIE41_RS07965	0.46	+0.2
1,636,240	+		ABIE41_RS07965	0.46	-0.1
1,636,240	+		ABIE41_RS07965	0.46	-0.4
1,636,240	+		ABIE41_RS07965	0.46	+0.2
1,636,240	+		ABIE41_RS07965	0.46	-0.3
1,636,241	-		ABIE41_RS07965	0.46	+0.1
1,636,807	-				-0.1
1,636,858	+				-0.2
1,636,858	+				-0.1
1,636,858	+				-0.3
1,636,958	+				-0.4
1,636,958	+				-2.1
1,636,958	+				+0.1
1,636,958	+				-0.5
1,636,958	+				+0.1
1,636,959	-				+0.4
1,636,959	-				-0.7
1,636,959	-				+0.4
1,636,959	-				-0.0
1,637,213	+		ABIE41_RS07970	0.24	-0.1
1,637,214	-		ABIE41_RS07970	0.24	+0.7
1,637,498	+		ABIE41_RS07970	0.49	-0.0
1,637,498	+		ABIE41_RS07970	0.49	+0.2
1,637,499	-		ABIE41_RS07970	0.49	+0.1
1,637,562	-		ABIE41_RS07970	0.54	+0.5
1,637,643	-		ABIE41_RS07970	0.61	+0.5
1,637,643	-		ABIE41_RS07970	0.61	+0.8
1,637,708	+		ABIE41_RS07970	0.66	+0.5
1,637,708	+		ABIE41_RS07970	0.66	-0.1
1,637,708	+		ABIE41_RS07970	0.66	-0.2
1,637,708	+		ABIE41_RS07970	0.66	+0.7
1,637,708	+		ABIE41_RS07970	0.66	-0.1
1,637,709	-		ABIE41_RS07970	0.67	+0.1
1,637,709	-		ABIE41_RS07970	0.67	+0.3
1,637,709	-		ABIE41_RS07970	0.67	+0.7
1,637,709	-		ABIE41_RS07970	0.67	-0.3
1,637,709	-		ABIE41_RS07970	0.67	+1.7