Strain Fitness in Bosea sp. OAE506 around ABIE41_RS08615

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
1,781,401	+		ABIE41_RS08610	0.56	-5.3
1,781,401	+		ABIE41_RS08610	0.56	-1.4
1,781,423	+		ABIE41_RS08610	0.57	-3.5
1,781,424	-		ABIE41_RS08610	0.57	-1.2
1,781,424	-		ABIE41_RS08610	0.57	-3.7
1,781,424	-		ABIE41_RS08610	0.57	-3.8
1,781,918	+		ABIE41_RS08610	0.80	-3.1
1,782,060	+		ABIE41_RS08610	0.86	-2.5
1,782,171	-				-4.2
1,782,344	+				+0.2
1,782,344	+				+0.3
1,782,344	+				-0.7
1,782,344	+				-0.2
1,782,344	+				+1.9
1,782,345	-				-0.1
1,782,345	-				-0.8
1,782,345	-				-0.2
1,782,345	-				-2.0
1,782,347	-				+0.1
1,782,347	-				-0.4
1,782,475	+		ABIE41_RS08615	0.41	+0.9
1,782,475	+		ABIE41_RS08615	0.41	+0.0
1,782,476	-		ABIE41_RS08615	0.41	-0.5
1,782,541	+		ABIE41_RS08615	0.68	-0.3
1,782,541	+		ABIE41_RS08615	0.68	-0.5
1,782,541	+		ABIE41_RS08615	0.68	-0.3
1,782,542	-		ABIE41_RS08615	0.69	-0.3
1,782,614	-				-0.4
1,782,850	+		ABIE41_RS08620	0.42	-0.3
1,782,851	-		ABIE41_RS08620	0.42	-1.3
1,782,928	+		ABIE41_RS08620	0.57	-0.1
1,782,928	+		ABIE41_RS08620	0.57	+0.3
1,782,929	-		ABIE41_RS08620	0.58	+0.2
1,783,012	+		ABIE41_RS08620	0.74	+0.9
1,783,013	-		ABIE41_RS08620	0.74	+0.6
1,783,013	-		ABIE41_RS08620	0.74	+0.3
1,783,013	-		ABIE41_RS08620	0.74	+1.2
1,783,013	-		ABIE41_RS08620	0.74	-0.2
1,783,148	+				-0.4
1,783,148	+				-0.2
1,783,148	+				+0.2
1,783,148	+				-0.7
1,783,148	+				-0.1
1,783,354	-		ABIE41_RS08625	0.57	+0.4
1,783,583	+				+0.2
1,783,584	-				+0.4