Strain Fitness in Bosea sp. OAE506 around ABIE41_RS07980

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
1,638,517	+		ABIE41_RS07975	0.31	-0.1
1,638,517	+		ABIE41_RS07975	0.31	+0.1
1,638,517	+		ABIE41_RS07975	0.31	+0.8
1,638,517	+		ABIE41_RS07975	0.31	-0.7
1,638,517	+		ABIE41_RS07975	0.31	-1.3
1,638,517	+		ABIE41_RS07975	0.31	-0.2
1,638,517	+		ABIE41_RS07975	0.31	+0.4
1,638,517	+		ABIE41_RS07975	0.31	-0.6
1,638,517	+		ABIE41_RS07975	0.31	+0.3
1,638,518	-		ABIE41_RS07975	0.31	-0.8
1,638,518	-		ABIE41_RS07975	0.31	+0.2
1,638,518	-		ABIE41_RS07975	0.31	+0.5
1,638,518	-		ABIE41_RS07975	0.31	+0.3
1,638,518	-		ABIE41_RS07975	0.31	+0.8
1,638,518	-		ABIE41_RS07975	0.31	-0.3
1,638,832	+		ABIE41_RS07975	0.66	-0.5
1,638,832	+		ABIE41_RS07975	0.66	+0.1
1,638,833	-		ABIE41_RS07975	0.66	+0.2
1,638,833	-		ABIE41_RS07975	0.66	-1.2
1,638,833	-		ABIE41_RS07975	0.66	+1.0
1,638,833	-		ABIE41_RS07975	0.66	-0.6
1,638,922	+		ABIE41_RS07975	0.76	-0.7
1,638,922	+		ABIE41_RS07975	0.76	+0.2
1,638,922	+		ABIE41_RS07975	0.76	-1.1
1,638,922	+		ABIE41_RS07975	0.76	-0.1
1,638,922	+		ABIE41_RS07975	0.76	+0.1
1,638,923	-		ABIE41_RS07975	0.76	-0.9
1,638,923	-		ABIE41_RS07975	0.76	+0.1
1,638,923	-		ABIE41_RS07975	0.76	+0.4
1,638,923	-		ABIE41_RS07975	0.76	-0.2
1,638,923	-		ABIE41_RS07975	0.76	+0.9
1,639,225	+				-0.8
1,639,225	+				-0.3
1,639,225	+				-1.1
1,639,225	+				+0.2
1,639,225	+				-0.7
1,639,226	-				+0.1
1,639,226	-				-0.3
1,639,226	-				-0.1
1,639,226	-				-0.3
1,639,226	-				-0.5
1,639,226	-				-0.2
1,639,226	-				+1.1
1,639,502	+		ABIE41_RS07980	0.11	-0.5
1,639,502	+		ABIE41_RS07980	0.11	-0.7
1,639,502	+		ABIE41_RS07980	0.11	-0.6
1,639,503	-		ABIE41_RS07980	0.11	-0.7
1,639,598	+		ABIE41_RS07980	0.17	+1.1
1,639,598	+		ABIE41_RS07980	0.17	-0.7
1,639,598	+		ABIE41_RS07980	0.17	-0.5
1,639,599	-		ABIE41_RS07980	0.17	-0.4
1,639,599	-		ABIE41_RS07980	0.17	-1.9
1,639,676	+		ABIE41_RS07980	0.22	-1.4
1,639,676	+		ABIE41_RS07980	0.22	-0.9
1,639,676	+		ABIE41_RS07980	0.22	+1.1
1,639,676	+		ABIE41_RS07980	0.22	-0.5
1,639,676	+		ABIE41_RS07980	0.22	-0.9
1,639,676	+		ABIE41_RS07980	0.22	-0.6
1,639,676	+		ABIE41_RS07980	0.22	-0.4
1,639,677	-		ABIE41_RS07980	0.22	+0.5
1,639,677	-		ABIE41_RS07980	0.22	-0.1
1,639,677	-		ABIE41_RS07980	0.22	-0.4
1,639,677	-		ABIE41_RS07980	0.22	+0.0
1,639,677	-		ABIE41_RS07980	0.22	-1.0
1,639,874	+		ABIE41_RS07980	0.34	-1.5
1,639,943	+		ABIE41_RS07980	0.38	-0.0
1,639,973	+		ABIE41_RS07980	0.40	+0.7
1,639,973	+		ABIE41_RS07980	0.40	-0.5
1,639,973	+		ABIE41_RS07980	0.40	-0.6
1,639,973	+		ABIE41_RS07980	0.40	-0.2
1,639,974	-		ABIE41_RS07980	0.40	-0.3
1,640,129	+		ABIE41_RS07980	0.50	+0.4
1,640,129	+		ABIE41_RS07980	0.50	-0.9
1,640,130	-		ABIE41_RS07980	0.50	-0.6
1,640,130	-		ABIE41_RS07980	0.50	-0.3
1,640,130	-		ABIE41_RS07980	0.50	-1.2
1,640,130	-		ABIE41_RS07980	0.50	-0.3
1,640,130	-		ABIE41_RS07980	0.50	+0.4
1,640,313	+		ABIE41_RS07980	0.62	-1.3
1,640,998	-				-0.1
1,641,198	+		ABIE41_RS07985	0.30	-0.3
1,641,198	+		ABIE41_RS07985	0.30	+0.8
1,641,199	-		ABIE41_RS07985	0.30	-0.0
1,641,199	-		ABIE41_RS07985	0.30	-0.4
1,641,199	-		ABIE41_RS07985	0.30	+0.1
1,641,255	+		ABIE41_RS07985	0.36	+0.6
1,641,256	-		ABIE41_RS07985	0.36	-0.9
1,641,606	+		ABIE41_RS07985	0.75	+0.7
1,641,631	+		ABIE41_RS07985	0.78	-0.9
1,641,632	-		ABIE41_RS07985	0.78	+0.2
1,641,747	+				-0.1
1,641,785	+				-0.6