Strain Fitness in Bosea sp. OAE506 around ABIE41_RS17805
Experiment: Ying_all64 rep A; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_all64 rep A; time point 3 |
---|---|---|---|---|---|
remove | |||||
3,666,991 | - | ABIE41_RS17800 | 0.37 | -0.5 | |
3,667,086 | - | ABIE41_RS17800 | 0.44 | -2.0 | |
3,667,883 | - | -0.0 | |||
3,667,908 | - | -1.2 | |||
3,667,909 | + | +0.0 | |||
3,668,145 | + | ABIE41_RS17805 | 0.25 | -0.5 | |
3,668,334 | + | ABIE41_RS17805 | 0.52 | -2.1 | |
3,668,617 | + | +0.7 | |||
3,669,146 | - | ABIE41_RS17810 | 0.30 | -3.2 | |
3,669,254 | - | ABIE41_RS17810 | 0.37 | -4.2 | |
3,669,270 | + | ABIE41_RS17810 | 0.38 | -3.5 | |
3,669,270 | + | ABIE41_RS17810 | 0.38 | -2.7 | |
3,669,273 | + | ABIE41_RS17810 | 0.38 | -2.3 | |
3,669,499 | + | ABIE41_RS17810 | 0.53 | -3.0 | |
3,669,499 | + | ABIE41_RS17810 | 0.53 | -1.0 | |
3,669,499 | + | ABIE41_RS17810 | 0.53 | -1.5 | |
3,669,500 | - | ABIE41_RS17810 | 0.53 | -3.7 | |
3,669,500 | - | ABIE41_RS17810 | 0.53 | -4.3 | |
3,669,505 | + | ABIE41_RS17810 | 0.54 | -3.8 | |
3,669,548 | - | ABIE41_RS17810 | 0.57 | -2.6 | |
3,669,548 | - | ABIE41_RS17810 | 0.57 | -2.4 |
Or see this region's nucleotide sequence