Strain Fitness in Bosea sp. OAE506 around ABIE41_RS12660

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,595,687	-				-0.8
2,595,716	+				-0.2
2,595,966	+		ABIE41_RS12655	0.35	-1.2
2,595,967	-		ABIE41_RS12655	0.35	+0.2
2,595,967	-		ABIE41_RS12655	0.35	-0.3
2,595,967	-		ABIE41_RS12655	0.35	-0.7
2,596,314	+				-0.1
2,596,315	-				+2.0
2,596,315	-				-0.3
2,596,473	+				+0.2
2,596,554	+				-0.2
2,596,554	+				+0.7
2,596,623	+				+0.9
2,596,624	-				-0.3
2,596,725	+				-0.2
2,596,857	+		ABIE41_RS12660	0.13	-0.1
2,596,858	-		ABIE41_RS12660	0.13	-0.1
2,596,858	-		ABIE41_RS12660	0.13	-0.3
2,596,980	-		ABIE41_RS12660	0.19	+0.3
2,597,163	+		ABIE41_RS12660	0.27	+0.5
2,597,163	+		ABIE41_RS12660	0.27	-0.1
2,597,245	-		ABIE41_RS12660	0.31	+0.2
2,597,835	+		ABIE41_RS12660	0.57	-0.4
2,597,835	+		ABIE41_RS12660	0.57	+0.1
2,597,836	-		ABIE41_RS12660	0.58	-0.7
2,597,880	+		ABIE41_RS12660	0.60	+1.0
2,597,880	+		ABIE41_RS12660	0.60	+2.3
2,597,880	+		ABIE41_RS12660	0.60	+1.6
2,597,880	+		ABIE41_RS12660	0.60	-1.4
2,597,881	-		ABIE41_RS12660	0.60	-0.9
2,597,881	-		ABIE41_RS12660	0.60	+1.1
2,598,125	+		ABIE41_RS12660	0.71	+1.3
2,598,181	-		ABIE41_RS12660	0.73	-0.1
2,598,297	+		ABIE41_RS12660	0.78	-0.1
2,598,367	-		ABIE41_RS12660	0.82	-0.4
2,598,367	-		ABIE41_RS12660	0.82	+0.2
2,598,421	-		ABIE41_RS12660	0.84	-0.5
2,598,421	-		ABIE41_RS12660	0.84	+0.5
2,598,435	+		ABIE41_RS12660	0.85	+0.2
2,598,435	+		ABIE41_RS12660	0.85	+0.4
2,598,486	+		ABIE41_RS12660	0.87	+0.0
2,598,487	-		ABIE41_RS12660	0.87	+0.3
2,598,507	+		ABIE41_RS12660	0.88	-0.1
2,598,546	+		ABIE41_RS12660	0.90	+0.0
2,598,547	-		ABIE41_RS12660	0.90	+0.7
2,598,547	-		ABIE41_RS12660	0.90	-1.0
2,598,547	-		ABIE41_RS12660	0.90	+1.0
2,598,868	+				-0.2
2,598,868	+				+0.0
2,598,868	+				-0.6
2,598,869	-				-0.1
2,599,369	+		ABIE41_RS12665	0.46	+0.0
2,599,369	+		ABIE41_RS12665	0.46	-0.0
2,599,369	+		ABIE41_RS12665	0.46	+0.7
2,599,369	+		ABIE41_RS12665	0.46	+0.0
2,599,369	+		ABIE41_RS12665	0.46	+0.1
2,599,370	-		ABIE41_RS12665	0.46	-0.1
2,599,370	-		ABIE41_RS12665	0.46	-0.0
2,599,522	+		ABIE41_RS12665	0.65	-0.6
2,599,523	-		ABIE41_RS12665	0.65	-1.1