Strain Fitness in Bosea sp. OAE506 around ABIE41_RS10985

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,254,671	+		ABIE41_RS10980	0.33	-1.2
2,254,671	+		ABIE41_RS10980	0.33	+0.2
2,254,671	+		ABIE41_RS10980	0.33	-0.2
2,254,671	+		ABIE41_RS10980	0.33	+0.6
2,254,672	-		ABIE41_RS10980	0.33	-0.5
2,254,672	-		ABIE41_RS10980	0.33	+0.2
2,254,672	-		ABIE41_RS10980	0.33	-0.2
2,254,672	-		ABIE41_RS10980	0.33	-0.5
2,254,672	-		ABIE41_RS10980	0.33	+0.3
2,254,731	+		ABIE41_RS10980	0.38	+0.5
2,254,731	+		ABIE41_RS10980	0.38	+1.2
2,254,731	+		ABIE41_RS10980	0.38	+0.2
2,254,731	+		ABIE41_RS10980	0.38	+0.0
2,254,732	-		ABIE41_RS10980	0.38	-2.0
2,254,732	-		ABIE41_RS10980	0.38	-1.1
2,254,732	-		ABIE41_RS10980	0.38	-0.3
2,254,881	+		ABIE41_RS10980	0.52	+0.0
2,254,881	+		ABIE41_RS10980	0.52	+0.4
2,254,882	-		ABIE41_RS10980	0.52	-1.0
2,255,135	-		ABIE41_RS10980	0.74	+1.0
2,255,557	+		ABIE41_RS10985	0.17	-0.1
2,255,557	+		ABIE41_RS10985	0.17	-0.2
2,255,557	+		ABIE41_RS10985	0.17	-0.4
2,255,557	+		ABIE41_RS10985	0.17	-0.7
2,255,557	+		ABIE41_RS10985	0.17	+0.1
2,255,558	-		ABIE41_RS10985	0.18	-0.5
2,255,558	-		ABIE41_RS10985	0.18	-0.6
2,255,558	-		ABIE41_RS10985	0.18	-1.0
2,255,558	-		ABIE41_RS10985	0.18	-1.9
2,255,558	-		ABIE41_RS10985	0.18	-1.0
2,255,851	+				-0.3
2,255,851	+				-0.9
2,255,851	+				-0.7
2,255,851	+				-0.2
2,255,851	+				+0.0
2,255,852	-				-0.6
2,255,852	-				-1.4
2,255,852	-				+0.0
2,255,852	-				-1.1
2,255,852	-				-0.7
2,255,852	-				-0.8
2,255,852	-				-0.2
2,256,076	+		ABIE41_RS10990	0.37	+0.6
2,256,076	+		ABIE41_RS10990	0.37	-0.1
2,256,076	+		ABIE41_RS10990	0.37	+0.6
2,256,329	-		ABIE41_RS10990	0.87	+0.2
2,256,329	-		ABIE41_RS10990	0.87	-0.1
2,256,374	+				+0.7
2,256,374	+				+0.3
2,256,375	-				+0.3
2,256,392	+				-0.3
2,256,392	+				-0.6
2,256,392	+				-0.1
2,256,392	+				-0.1
2,256,393	-				+0.3
2,256,393	-				-0.3
2,256,853	-		ABIE41_RS10995	0.17	-0.1