Strain Fitness in Pseudomonas sp. RS175 around PFR28_03647

Experiment: Glycocyamine 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycocyamine 20 mM (C)
4,208,691	+				-0.8
4,208,692	-				-1.1
4,208,728	+		PFR28_03646	0.12	-0.6
4,208,729	-		PFR28_03646	0.13	+0.6
4,208,729	-		PFR28_03646	0.13	+0.1
4,208,747	+		PFR28_03646	0.14	+1.6
4,208,844	+		PFR28_03646	0.25	-0.4
4,208,845	-		PFR28_03646	0.25	+0.2
4,208,917	+		PFR28_03646	0.32	+0.5
4,208,968	+		PFR28_03646	0.37	-1.9
4,208,968	+		PFR28_03646	0.37	-0.9
4,208,968	+		PFR28_03646	0.37	-0.3
4,208,969	-		PFR28_03646	0.37	-1.4
4,209,013	+		PFR28_03646	0.42	+1.1
4,209,013	+		PFR28_03646	0.42	+0.1
4,209,014	-		PFR28_03646	0.42	-0.6
4,209,187	+		PFR28_03646	0.60	+0.3
4,209,188	-		PFR28_03646	0.60	+0.8
4,209,193	+		PFR28_03646	0.61	-0.1
4,209,193	+		PFR28_03646	0.61	-0.8
4,209,194	-		PFR28_03646	0.61	-0.1
4,209,194	-		PFR28_03646	0.61	-0.5
4,209,194	-		PFR28_03646	0.61	-0.5
4,209,194	-		PFR28_03646	0.61	+1.2
4,209,223	+		PFR28_03646	0.64	-0.5
4,209,223	+		PFR28_03646	0.64	-0.2
4,209,223	+		PFR28_03646	0.64	-1.6
4,209,223	+		PFR28_03646	0.64	-0.3
4,209,223	+		PFR28_03646	0.64	-1.4
4,209,223	+		PFR28_03646	0.64	+1.1
4,209,223	+		PFR28_03646	0.64	-0.1
4,209,223	+		PFR28_03646	0.64	+0.8
4,209,224	-		PFR28_03646	0.64	+0.9
4,209,224	-		PFR28_03646	0.64	+1.3
4,209,224	-		PFR28_03646	0.64	+0.9
4,209,224	-		PFR28_03646	0.64	-0.5
4,209,224	-		PFR28_03646	0.64	+0.2
4,209,224	-		PFR28_03646	0.64	+0.2
4,209,224	-		PFR28_03646	0.64	+1.9
4,209,224	-		PFR28_03646	0.64	+2.3
4,209,224	-		PFR28_03646	0.64	-0.4
4,209,224	-		PFR28_03646	0.64	-0.2
4,209,430	+		PFR28_03646	0.85	+0.3
4,209,523	+				+0.1
4,209,523	+				+1.2
4,209,523	+				+1.1
4,209,523	+				+1.5
4,209,523	+				-0.3
4,209,524	-				-1.4
4,209,524	-				+1.5
4,209,524	-				-0.5
4,209,524	-				+0.1
4,209,524	-				+0.4
4,209,524	-				+0.3
4,209,524	-				-0.3
4,209,652	+				-1.4
4,209,653	-				-0.1
4,209,733	-		PFR28_03647	0.17	+0.4
4,210,116	+		PFR28_03647	0.58	-0.8
4,210,116	+		PFR28_03647	0.58	-1.1
4,210,117	-		PFR28_03647	0.58	+1.4
4,210,117	-		PFR28_03647	0.58	+1.9
4,210,241	-		PFR28_03647	0.71	+0.4
4,210,306	+		PFR28_03647	0.78	-1.6
4,210,306	+		PFR28_03647	0.78	-1.0
4,210,307	-		PFR28_03647	0.78	+0.5
4,210,307	-		PFR28_03647	0.78	+0.1
4,210,307	-		PFR28_03647	0.78	-0.1
4,210,307	-		PFR28_03647	0.78	-1.9
4,210,307	-		PFR28_03647	0.78	+1.6
4,210,307	-		PFR28_03647	0.78	-0.1
4,210,307	-		PFR28_03647	0.78	+0.7
4,210,307	-		PFR28_03647	0.78	-2.0
4,210,307	-		PFR28_03647	0.78	-0.5
4,210,307	-		PFR28_03647	0.78	+0.1
4,210,307	-		PFR28_03647	0.78	-0.1
4,210,314	+		PFR28_03647	0.79	-1.6
4,210,315	-		PFR28_03647	0.79	-1.2
4,210,315	-		PFR28_03647	0.79	-1.2
4,210,420	+				-1.8
4,210,421	-				+1.9
4,210,421	-				-0.7
4,210,519	+				+0.1
4,210,520	-				-0.2
4,210,520	-				-1.0
4,210,520	-				-0.4
4,210,610	+				+0.3
4,210,610	+				+0.7
4,210,610	+				-0.2
4,210,610	+				-0.2
4,210,610	+				-1.4
4,210,610	+				-0.4
4,210,611	-				-1.2
4,210,611	-				-0.6
4,210,611	-				-0.5
4,210,611	-				-1.0
4,210,614	+				-0.1
4,210,614	+				+0.5
4,210,614	+				-0.1
4,210,614	+				-0.1
4,210,614	+				-1.2
4,210,614	+				+1.2
4,210,614	+				-0.2
4,210,614	+				-0.7
4,210,614	+				+0.6
4,210,614	+				-1.1
4,210,614	+				+1.8
4,210,614	+				-1.6
4,210,615	-				+0.4
4,210,615	-				-1.1
4,210,615	-				-0.1
4,210,615	-				+0.8
4,210,615	-				+0.5
4,210,615	-				+1.4
4,210,615	-				-0.2
4,210,615	-				-1.6
4,210,731	+		PFR28_03648	0.14	-0.1
4,210,731	+		PFR28_03648	0.14	-0.4
4,210,731	+		PFR28_03648	0.14	-0.1
4,210,732	-		PFR28_03648	0.15	+0.3
4,210,732	-		PFR28_03648	0.15	-2.0
4,210,823	+		PFR28_03648	0.21	+0.1
4,210,824	-		PFR28_03648	0.21	+0.1
4,210,824	-		PFR28_03648	0.21	+0.1
4,210,824	-		PFR28_03648	0.21	-0.6
4,210,824	-		PFR28_03648	0.21	-0.9
4,210,932	+		PFR28_03648	0.28	-0.1
4,210,932	+		PFR28_03648	0.28	+0.4
4,210,932	+		PFR28_03648	0.28	-0.3
4,210,932	+		PFR28_03648	0.28	-0.6
4,210,932	+		PFR28_03648	0.28	-0.4
4,210,932	+		PFR28_03648	0.28	+0.9
4,210,932	+		PFR28_03648	0.28	+0.4
4,210,932	+		PFR28_03648	0.28	+0.5
4,210,932	+		PFR28_03648	0.28	+2.5
4,210,932	+		PFR28_03648	0.28	+0.5
4,210,932	+		PFR28_03648	0.28	+0.6
4,210,932	+		PFR28_03648	0.28	-3.8
4,210,932	+		PFR28_03648	0.28	-0.5
4,210,932	+		PFR28_03648	0.28	+1.6
4,210,932	+		PFR28_03648	0.28	+1.7
4,210,932	+		PFR28_03648	0.28	+0.4
4,210,932	+		PFR28_03648	0.28	-0.9
4,210,932	+		PFR28_03648	0.28	+0.1
4,210,933	-		PFR28_03648	0.28	+1.9
4,210,933	-		PFR28_03648	0.28	+2.5
4,210,933	-		PFR28_03648	0.28	-0.4
4,210,933	-		PFR28_03648	0.28	+0.1
4,210,933	-		PFR28_03648	0.28	-0.2
4,210,933	-		PFR28_03648	0.28	-0.8
4,210,933	-		PFR28_03648	0.28	-1.3
4,210,933	-		PFR28_03648	0.28	-0.9
4,210,933	-		PFR28_03648	0.28	-0.2
4,210,933	-		PFR28_03648	0.28	-0.9
4,210,933	-		PFR28_03648	0.28	-0.4
4,210,933	-		PFR28_03648	0.28	-0.6
4,210,952	+		PFR28_03648	0.30	+0.4
4,210,953	-		PFR28_03648	0.30	+0.1
4,210,988	+		PFR28_03648	0.32	-0.1
4,210,988	+		PFR28_03648	0.32	-0.5
4,210,989	-		PFR28_03648	0.32	-0.2
4,211,112	+		PFR28_03648	0.41	-1.1
4,211,190	-		PFR28_03648	0.46	-1.1
4,211,292	+		PFR28_03648	0.53	+0.1
4,211,292	+		PFR28_03648	0.53	-1.4
4,211,293	-		PFR28_03648	0.53	-0.5
4,211,293	-		PFR28_03648	0.53	-1.4
4,211,372	+		PFR28_03648	0.58	+1.9
4,211,372	+		PFR28_03648	0.58	-0.1
4,211,372	+		PFR28_03648	0.58	+1.1
4,211,372	+		PFR28_03648	0.58	-0.5
4,211,372	+		PFR28_03648	0.58	-1.3
4,211,372	+		PFR28_03648	0.58	-0.9
4,211,372	+		PFR28_03648	0.58	+1.2
4,211,373	-		PFR28_03648	0.58	-1.1
4,211,373	-		PFR28_03648	0.58	-0.1
4,211,373	-		PFR28_03648	0.58	+0.8
4,211,373	-		PFR28_03648	0.58	+0.2
4,211,373	-		PFR28_03648	0.58	+1.9
4,211,373	-		PFR28_03648	0.58	-0.1
4,211,373	-		PFR28_03648	0.58	-2.2
4,211,374	+		PFR28_03648	0.58	-0.7
4,211,374	+		PFR28_03648	0.58	-1.0
4,211,375	-		PFR28_03648	0.59	+0.9
4,211,375	-		PFR28_03648	0.59	-1.4
4,211,375	-		PFR28_03648	0.59	-0.4
4,211,375	-		PFR28_03648	0.59	+0.2
4,211,375	-		PFR28_03648	0.59	+1.8
4,211,375	-		PFR28_03648	0.59	-2.3