Strain Fitness in Pseudomonas sp. RS175 around PFR28_02144

Experiment: L-Carnitine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Carnitine 10 mM (C)
2,462,866	-		PFR28_02143	0.10	+0.9
2,462,885	+		PFR28_02143	0.12	+0.1
2,462,885	+		PFR28_02143	0.12	-0.3
2,462,885	+		PFR28_02143	0.12	+1.7
2,462,885	+		PFR28_02143	0.12	-0.7
2,462,885	+		PFR28_02143	0.12	+0.4
2,462,886	-		PFR28_02143	0.12	+0.5
2,462,886	-		PFR28_02143	0.12	-1.3
2,462,886	-		PFR28_02143	0.12	-0.2
2,462,886	-		PFR28_02143	0.12	+0.9
2,462,887	+		PFR28_02143	0.12	+0.1
2,462,887	+		PFR28_02143	0.12	-0.9
2,462,887	+		PFR28_02143	0.12	+0.3
2,462,888	-		PFR28_02143	0.13	+0.3
2,462,888	-		PFR28_02143	0.13	-0.4
2,462,888	-		PFR28_02143	0.13	+1.0
2,462,888	-		PFR28_02143	0.13	-0.1
2,462,888	-		PFR28_02143	0.13	+0.2
2,462,939	+		PFR28_02143	0.17	-0.4
2,462,939	+		PFR28_02143	0.17	+0.3
2,462,939	+		PFR28_02143	0.17	-0.2
2,462,940	-		PFR28_02143	0.18	-0.2
2,462,940	-		PFR28_02143	0.18	-0.2
2,462,940	-		PFR28_02143	0.18	+0.4
2,462,949	+		PFR28_02143	0.18	-0.9
2,463,110	+		PFR28_02143	0.34	+0.9
2,463,110	+		PFR28_02143	0.34	+1.5
2,463,111	-		PFR28_02143	0.34	-0.7
2,463,111	-		PFR28_02143	0.34	-0.7
2,463,113	+		PFR28_02143	0.34	+0.1
2,463,113	+		PFR28_02143	0.34	-0.1
2,463,113	+		PFR28_02143	0.34	+1.1
2,463,113	+		PFR28_02143	0.34	+0.8
2,463,113	+		PFR28_02143	0.34	-1.0
2,463,114	-		PFR28_02143	0.34	+0.2
2,463,114	-		PFR28_02143	0.34	-0.7
2,463,119	+		PFR28_02143	0.35	+0.1
2,463,120	-		PFR28_02143	0.35	+0.3
2,463,252	+		PFR28_02143	0.48	+0.1
2,463,335	+		PFR28_02143	0.56	-0.7
2,463,335	+		PFR28_02143	0.56	-0.9
2,463,335	+		PFR28_02143	0.56	-0.1
2,463,335	+		PFR28_02143	0.56	+0.3
2,463,336	-		PFR28_02143	0.56	-0.1
2,463,336	-		PFR28_02143	0.56	+0.6
2,463,336	-		PFR28_02143	0.56	+0.5
2,463,377	+		PFR28_02143	0.60	+1.9
2,463,378	-		PFR28_02143	0.60	-0.9
2,463,392	+		PFR28_02143	0.62	-0.1
2,463,392	+		PFR28_02143	0.62	+1.0
2,463,392	+		PFR28_02143	0.62	+1.7
2,463,392	+		PFR28_02143	0.62	-0.7
2,463,392	+		PFR28_02143	0.62	-0.1
2,463,392	+		PFR28_02143	0.62	+0.9
2,463,392	+		PFR28_02143	0.62	-0.3
2,463,392	+		PFR28_02143	0.62	-0.4
2,463,392	+		PFR28_02143	0.62	+0.0
2,463,392	+		PFR28_02143	0.62	+0.5
2,463,393	-		PFR28_02143	0.62	-0.5
2,463,393	-		PFR28_02143	0.62	+0.3
2,463,393	-		PFR28_02143	0.62	-0.4
2,463,393	-		PFR28_02143	0.62	+0.1
2,463,393	-		PFR28_02143	0.62	-0.7
2,463,393	-		PFR28_02143	0.62	-1.1
2,463,393	-		PFR28_02143	0.62	+1.0
2,463,393	-		PFR28_02143	0.62	+1.5
2,463,393	-		PFR28_02143	0.62	-2.2
2,463,393	-		PFR28_02143	0.62	-0.2
2,463,395	+		PFR28_02143	0.62	-1.0
2,463,395	+		PFR28_02143	0.62	-0.0
2,463,396	-		PFR28_02143	0.62	-0.1
2,463,436	+		PFR28_02143	0.66	-0.9
2,463,500	+		PFR28_02143	0.72	-0.8
2,463,500	+		PFR28_02143	0.72	-0.3
2,463,500	+		PFR28_02143	0.72	+1.9
2,463,500	+		PFR28_02143	0.72	+0.1
2,463,500	+		PFR28_02143	0.72	+0.7
2,463,501	-		PFR28_02143	0.72	-0.4
2,463,501	-		PFR28_02143	0.72	-0.3
2,463,501	-		PFR28_02143	0.72	-0.0
2,463,527	+		PFR28_02143	0.75	+0.3
2,463,528	-		PFR28_02143	0.75	-0.7
2,463,528	-		PFR28_02143	0.75	+1.7
2,463,528	-		PFR28_02143	0.75	+0.6
2,463,531	-		PFR28_02143	0.75	+0.9
2,463,531	-		PFR28_02143	0.75	+0.3
2,463,547	+		PFR28_02143	0.77	-0.5
2,463,547	+		PFR28_02143	0.77	+1.9
2,463,547	+		PFR28_02143	0.77	-0.5
2,463,606	+		PFR28_02143	0.82	+0.1
2,463,606	+		PFR28_02143	0.82	+0.1
2,463,607	-		PFR28_02143	0.82	+2.1
2,463,607	-		PFR28_02143	0.82	+0.8
2,463,648	+		PFR28_02143	0.86	-0.8
2,463,648	+		PFR28_02143	0.86	-1.8
2,463,648	+		PFR28_02143	0.86	-0.9
2,463,648	+		PFR28_02143	0.86	-1.9
2,463,649	-		PFR28_02143	0.86	-0.2
2,463,649	-		PFR28_02143	0.86	-1.5
2,463,649	-		PFR28_02143	0.86	-0.5
2,463,904	+		PFR28_02144	0.11	+0.8
2,464,108	+		PFR28_02144	0.32	+0.2
2,464,108	+		PFR28_02144	0.32	-0.2
2,464,109	-		PFR28_02144	0.32	+0.1
2,464,109	-		PFR28_02144	0.32	+0.0
2,464,366	+		PFR28_02144	0.59	-0.1
2,464,366	+		PFR28_02144	0.59	+0.7
2,464,366	+		PFR28_02144	0.59	-0.6
2,464,366	+		PFR28_02144	0.59	-1.7
2,464,366	+		PFR28_02144	0.59	-0.2
2,464,366	+		PFR28_02144	0.59	-0.2
2,464,366	+		PFR28_02144	0.59	+0.1
2,464,367	-		PFR28_02144	0.59	+0.1
2,464,367	-		PFR28_02144	0.59	+1.2
2,464,367	-		PFR28_02144	0.59	-0.1
2,464,367	-		PFR28_02144	0.59	-0.9
2,464,367	-		PFR28_02144	0.59	+0.5
2,464,367	-		PFR28_02144	0.59	+0.0
2,464,367	-		PFR28_02144	0.59	+0.3
2,464,657	+		PFR28_02144	0.89	+0.2
2,464,658	-		PFR28_02144	0.89	-0.5
2,464,658	-		PFR28_02144	0.89	+0.4
2,464,687	+				-1.1
2,464,688	-				-0.5
2,464,832	-				+1.3
2,464,903	+				+0.7
2,464,903	+				+2.3
2,464,903	+				-1.3
2,464,904	-				+0.1
2,464,944	+				+0.9
2,464,944	+				-0.1
2,464,944	+				-1.2
2,464,945	-				+0.2
2,465,023	+				+0.9
2,465,024	-				-1.7
2,465,024	-				+0.3
2,465,024	-				-0.5
2,465,024	-				-0.7
2,465,024	-				-0.4
2,465,035	+				+1.7
2,465,036	-				-1.3
2,465,036	-				+0.0
2,465,124	+				-0.5
2,465,306	+				-1.2
2,465,306	+				-1.0
2,465,306	+				-0.7
2,465,306	+				-1.1
2,465,306	+				-0.9
2,465,307	-				-1.0
2,465,307	-				-1.7
2,465,307	-				-1.2
2,465,307	-				-0.5
2,465,307	-				-1.5
2,465,307	-				-1.0
2,465,307	-				-2.2
2,465,307	-				-1.3
2,465,307	-				-1.0
2,465,307	-				-0.8
2,465,307	-				-1.8
2,465,307	-				-1.6
2,465,307	-				-2.2
2,465,307	-				-1.6
2,465,307	-				-2.5
2,465,310	+				-0.9
2,465,310	+				-1.4
2,465,311	-				-2.0
2,465,311	-				-0.2
2,465,311	-				-2.0
2,465,311	-				-1.5
2,465,686	+		PFR28_02145	0.24	-1.9
2,465,686	+		PFR28_02145	0.24	-2.0
2,465,686	+		PFR28_02145	0.24	-2.3
2,465,687	-		PFR28_02145	0.24	-1.5
2,465,687	-		PFR28_02145	0.24	-1.8
2,465,687	-		PFR28_02145	0.24	-1.7
2,465,687	-		PFR28_02145	0.24	-1.4
2,465,687	-		PFR28_02145	0.24	-1.7
2,465,687	-		PFR28_02145	0.24	-1.5
2,465,687	-		PFR28_02145	0.24	-1.6
2,465,687	-		PFR28_02145	0.24	-2.9
2,465,687	-		PFR28_02145	0.24	-2.5
2,465,710	+		PFR28_02145	0.25	-2.4
2,465,711	-		PFR28_02145	0.25	-1.8
2,465,711	-		PFR28_02145	0.25	-0.5
2,465,731	+		PFR28_02145	0.27	-1.7