Strain Fitness in Pseudomonas sp. RS175 around PFR28_02143

Experiment: L-Carnitine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Carnitine 10 mM (C)
2,461,773	-		PFR28_02141	0.69	+1.3
2,461,773	-		PFR28_02141	0.69	+0.5
2,461,816	-		PFR28_02141	0.74	-0.4
2,461,816	-		PFR28_02141	0.74	-0.4
2,461,817	+		PFR28_02141	0.74	+0.5
2,461,817	+		PFR28_02141	0.74	+1.1
2,461,817	+		PFR28_02141	0.74	+0.3
2,461,817	+		PFR28_02141	0.74	+0.4
2,461,817	+		PFR28_02141	0.74	+0.9
2,461,817	+		PFR28_02141	0.74	-1.1
2,461,817	+		PFR28_02141	0.74	-0.9
2,461,817	+		PFR28_02141	0.74	+0.1
2,461,817	+		PFR28_02141	0.74	-0.9
2,461,817	+		PFR28_02141	0.74	-0.9
2,461,817	+		PFR28_02141	0.74	+0.7
2,461,817	+		PFR28_02141	0.74	+0.0
2,461,817	+		PFR28_02141	0.74	-0.1
2,461,817	+		PFR28_02141	0.74	+0.5
2,461,817	+		PFR28_02141	0.74	+0.7
2,461,818	-		PFR28_02141	0.74	+0.2
2,461,818	-		PFR28_02141	0.74	-0.7
2,461,818	-		PFR28_02141	0.74	+1.1
2,461,818	-		PFR28_02141	0.74	+1.5
2,461,818	-		PFR28_02141	0.74	-1.5
2,461,818	-		PFR28_02141	0.74	-0.2
2,461,818	-		PFR28_02141	0.74	-0.0
2,461,818	-		PFR28_02141	0.74	+0.4
2,461,818	-		PFR28_02141	0.74	+0.1
2,461,818	-		PFR28_02141	0.74	+1.6
2,461,818	-		PFR28_02141	0.74	-0.1
2,461,818	-		PFR28_02141	0.74	-1.2
2,461,818	-		PFR28_02141	0.74	-0.4
2,461,818	-		PFR28_02141	0.74	+0.2
2,461,818	-		PFR28_02141	0.74	+0.3
2,461,889	+		PFR28_02141	0.81	-0.3
2,461,889	+		PFR28_02141	0.81	-0.0
2,461,890	-		PFR28_02141	0.81	+0.1
2,461,890	-		PFR28_02141	0.81	+0.1
2,461,918	+		PFR28_02141	0.84	-0.1
2,461,919	-		PFR28_02141	0.84	+0.3
2,461,919	-		PFR28_02141	0.84	+0.9
2,461,919	-		PFR28_02141	0.84	-0.9
2,462,094	-				-2.1
2,462,164	+				+1.4
2,462,164	+				+1.4
2,462,216	+				-0.1
2,462,216	+				-0.6
2,462,217	-				+0.3
2,462,479	+		PFR28_02142	0.60	+0.6
2,462,480	-		PFR28_02142	0.60	+0.6
2,462,495	-		PFR28_02142	0.64	-0.5
2,462,592	+		PFR28_02142	0.85	-0.4
2,462,702	-				-1.1
2,462,866	-		PFR28_02143	0.10	-0.3
2,462,885	+		PFR28_02143	0.12	+0.6
2,462,885	+		PFR28_02143	0.12	-0.5
2,462,885	+		PFR28_02143	0.12	+1.8
2,462,885	+		PFR28_02143	0.12	+0.2
2,462,885	+		PFR28_02143	0.12	+0.3
2,462,886	-		PFR28_02143	0.12	+0.1
2,462,886	-		PFR28_02143	0.12	+0.5
2,462,886	-		PFR28_02143	0.12	+0.7
2,462,886	-		PFR28_02143	0.12	+0.3
2,462,887	+		PFR28_02143	0.12	+1.1
2,462,887	+		PFR28_02143	0.12	-0.8
2,462,887	+		PFR28_02143	0.12	-0.1
2,462,888	-		PFR28_02143	0.13	+2.3
2,462,888	-		PFR28_02143	0.13	-0.1
2,462,888	-		PFR28_02143	0.13	+1.2
2,462,888	-		PFR28_02143	0.13	-1.5
2,462,888	-		PFR28_02143	0.13	-0.7
2,462,939	+		PFR28_02143	0.17	+0.3
2,462,939	+		PFR28_02143	0.17	+0.1
2,462,939	+		PFR28_02143	0.17	-0.2
2,462,940	-		PFR28_02143	0.18	+0.1
2,462,940	-		PFR28_02143	0.18	-0.5
2,462,940	-		PFR28_02143	0.18	+0.3
2,462,949	+		PFR28_02143	0.18	-1.2
2,463,110	+		PFR28_02143	0.34	+1.1
2,463,110	+		PFR28_02143	0.34	+1.6
2,463,111	-		PFR28_02143	0.34	-0.5
2,463,111	-		PFR28_02143	0.34	+0.1
2,463,113	+		PFR28_02143	0.34	-0.5
2,463,113	+		PFR28_02143	0.34	+0.5
2,463,113	+		PFR28_02143	0.34	+1.1
2,463,113	+		PFR28_02143	0.34	+0.8
2,463,113	+		PFR28_02143	0.34	-1.8
2,463,114	-		PFR28_02143	0.34	+0.7
2,463,114	-		PFR28_02143	0.34	+0.2
2,463,119	+		PFR28_02143	0.35	-0.3
2,463,120	-		PFR28_02143	0.35	-0.4
2,463,252	+		PFR28_02143	0.48	-0.2
2,463,335	+		PFR28_02143	0.56	-2.7
2,463,335	+		PFR28_02143	0.56	-0.5
2,463,335	+		PFR28_02143	0.56	+0.1
2,463,335	+		PFR28_02143	0.56	+2.1
2,463,336	-		PFR28_02143	0.56	+0.5
2,463,336	-		PFR28_02143	0.56	-0.0
2,463,336	-		PFR28_02143	0.56	+0.2
2,463,377	+		PFR28_02143	0.60	+0.7
2,463,378	-		PFR28_02143	0.60	+0.2
2,463,392	+		PFR28_02143	0.62	-0.3
2,463,392	+		PFR28_02143	0.62	+1.3
2,463,392	+		PFR28_02143	0.62	+1.9
2,463,392	+		PFR28_02143	0.62	-0.8
2,463,392	+		PFR28_02143	0.62	-1.5
2,463,392	+		PFR28_02143	0.62	+0.4
2,463,392	+		PFR28_02143	0.62	+0.5
2,463,392	+		PFR28_02143	0.62	+0.5
2,463,392	+		PFR28_02143	0.62	-0.4
2,463,392	+		PFR28_02143	0.62	+1.1
2,463,393	-		PFR28_02143	0.62	+0.4
2,463,393	-		PFR28_02143	0.62	+0.1
2,463,393	-		PFR28_02143	0.62	-1.3
2,463,393	-		PFR28_02143	0.62	-0.6
2,463,393	-		PFR28_02143	0.62	-0.5
2,463,393	-		PFR28_02143	0.62	+0.1
2,463,393	-		PFR28_02143	0.62	-1.3
2,463,393	-		PFR28_02143	0.62	-0.9
2,463,393	-		PFR28_02143	0.62	+0.1
2,463,393	-		PFR28_02143	0.62	-0.0
2,463,395	+		PFR28_02143	0.62	+1.1
2,463,395	+		PFR28_02143	0.62	+0.3
2,463,396	-		PFR28_02143	0.62	+0.3
2,463,436	+		PFR28_02143	0.66	+0.4
2,463,500	+		PFR28_02143	0.72	-0.6
2,463,500	+		PFR28_02143	0.72	+0.6
2,463,500	+		PFR28_02143	0.72	+1.6
2,463,500	+		PFR28_02143	0.72	+1.1
2,463,500	+		PFR28_02143	0.72	+0.2
2,463,501	-		PFR28_02143	0.72	-0.8
2,463,501	-		PFR28_02143	0.72	-0.6
2,463,501	-		PFR28_02143	0.72	-0.5
2,463,527	+		PFR28_02143	0.75	+0.6
2,463,528	-		PFR28_02143	0.75	-0.9
2,463,528	-		PFR28_02143	0.75	+1.8
2,463,528	-		PFR28_02143	0.75	+0.8
2,463,531	-		PFR28_02143	0.75	+1.2
2,463,531	-		PFR28_02143	0.75	-1.5
2,463,547	+		PFR28_02143	0.77	+0.5
2,463,547	+		PFR28_02143	0.77	+2.1
2,463,547	+		PFR28_02143	0.77	-0.4
2,463,606	+		PFR28_02143	0.82	-0.0
2,463,606	+		PFR28_02143	0.82	-0.7
2,463,607	-		PFR28_02143	0.82	+0.1
2,463,607	-		PFR28_02143	0.82	+1.2
2,463,648	+		PFR28_02143	0.86	-0.0
2,463,648	+		PFR28_02143	0.86	-0.3
2,463,648	+		PFR28_02143	0.86	-0.1
2,463,648	+		PFR28_02143	0.86	-1.1
2,463,649	-		PFR28_02143	0.86	-0.6
2,463,649	-		PFR28_02143	0.86	-1.9
2,463,649	-		PFR28_02143	0.86	-0.2
2,463,904	+		PFR28_02144	0.11	+0.9
2,464,108	+		PFR28_02144	0.32	+0.3
2,464,108	+		PFR28_02144	0.32	-1.4
2,464,109	-		PFR28_02144	0.32	-0.5
2,464,109	-		PFR28_02144	0.32	-0.2
2,464,366	+		PFR28_02144	0.59	+0.1
2,464,366	+		PFR28_02144	0.59	-0.6
2,464,366	+		PFR28_02144	0.59	-0.9
2,464,366	+		PFR28_02144	0.59	+0.5
2,464,366	+		PFR28_02144	0.59	-0.5
2,464,366	+		PFR28_02144	0.59	-0.6
2,464,366	+		PFR28_02144	0.59	-0.7
2,464,367	-		PFR28_02144	0.59	-0.4
2,464,367	-		PFR28_02144	0.59	+0.1
2,464,367	-		PFR28_02144	0.59	+0.3
2,464,367	-		PFR28_02144	0.59	-0.1
2,464,367	-		PFR28_02144	0.59	-0.8
2,464,367	-		PFR28_02144	0.59	+0.4
2,464,367	-		PFR28_02144	0.59	-0.3
2,464,657	+		PFR28_02144	0.89	-0.3
2,464,658	-		PFR28_02144	0.89	-0.3
2,464,658	-		PFR28_02144	0.89	+1.2
2,464,687	+				-0.5
2,464,688	-				-0.7