Strain Fitness in Pseudomonas sp. RS175 around PFR28_04803

Experiment: L-Phenylalanine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine 5 mM (C)
5,483,795	-		PFR28_04802	0.56	+0.7
5,484,200	+		PFR28_04802	0.75	+1.2
5,484,356	+		PFR28_04802	0.83	-0.0
5,484,357	-		PFR28_04802	0.83	+0.9
5,484,572	+				-0.7
5,484,573	-				+1.3
5,484,615	+				-0.6
5,484,616	-				+0.4
5,484,616	-				+0.1
5,484,616	-				+2.8
5,484,720	-				-1.4
5,484,720	-				-0.3
5,484,765	-				+0.3
5,484,785	+				+1.1
5,484,786	-				+0.2
5,484,818	+		PFR28_04803	0.13	-0.3
5,484,819	-		PFR28_04803	0.13	-1.3
5,484,829	+		PFR28_04803	0.15	+0.1
5,484,829	+		PFR28_04803	0.15	-0.9
5,484,830	-		PFR28_04803	0.15	+0.7
5,484,830	-		PFR28_04803	0.15	+0.7
5,484,830	-		PFR28_04803	0.15	+0.2
5,484,904	+		PFR28_04803	0.30	-0.3
5,484,904	+		PFR28_04803	0.30	+0.3
5,484,904	+		PFR28_04803	0.30	+0.9
5,484,905	-		PFR28_04803	0.31	+0.4
5,484,905	-		PFR28_04803	0.31	+0.9
5,484,905	-		PFR28_04803	0.31	-0.7
5,484,911	+		PFR28_04803	0.32	-0.9
5,484,911	+		PFR28_04803	0.32	-1.3
5,484,911	+		PFR28_04803	0.32	-0.3
5,484,912	-		PFR28_04803	0.32	+0.2
5,484,912	-		PFR28_04803	0.32	+0.2
5,484,955	+		PFR28_04803	0.41	+0.1
5,484,955	+		PFR28_04803	0.41	-0.3
5,484,955	+		PFR28_04803	0.41	+1.4
5,484,955	+		PFR28_04803	0.41	+0.7
5,484,955	+		PFR28_04803	0.41	+0.2
5,484,956	-		PFR28_04803	0.41	-0.2
5,484,956	-		PFR28_04803	0.41	+0.0
5,484,956	-		PFR28_04803	0.41	-0.1
5,484,956	-		PFR28_04803	0.41	-1.1
5,484,956	-		PFR28_04803	0.41	+0.5
5,484,956	-		PFR28_04803	0.41	-0.2
5,485,030	+		PFR28_04803	0.56	+0.3
5,485,030	+		PFR28_04803	0.56	+0.3
5,485,031	-		PFR28_04803	0.56	-0.5
5,485,067	-		PFR28_04803	0.64	+1.1
5,485,067	-		PFR28_04803	0.64	+0.7
5,485,147	-		PFR28_04803	0.80	-0.4
5,485,147	-		PFR28_04803	0.80	-1.7
5,485,169	-		PFR28_04803	0.84	+0.2
5,485,169	-		PFR28_04803	0.84	-0.9
5,485,388	+				-0.6
5,485,388	+				+0.1
5,485,659	+				+0.7
5,485,744	+				+0.4
5,485,744	+				-0.3
5,485,744	+				+0.5
5,485,744	+				-0.3
5,485,744	+				+0.2
5,485,745	-				+1.9
5,485,745	-				-0.2
5,485,877	+		PFR28_04805	0.26	-0.8
5,485,877	+		PFR28_04805	0.26	+1.1
5,485,878	-		PFR28_04805	0.26	-0.1
5,485,890	+		PFR28_04805	0.28	-0.9
5,485,890	+		PFR28_04805	0.28	-0.9
5,485,890	+		PFR28_04805	0.28	+0.2
5,485,890	+		PFR28_04805	0.28	+0.7
5,485,891	-		PFR28_04805	0.28	+0.4
5,485,891	-		PFR28_04805	0.28	+0.2
5,486,005	+		PFR28_04805	0.48	+0.3
5,486,182	-		PFR28_04805	0.78	+0.7
5,486,182	-		PFR28_04805	0.78	+0.7
5,486,182	-		PFR28_04805	0.78	-0.8
5,486,182	-		PFR28_04805	0.78	-0.9