Strain Fitness in Pseudomonas sp. RS175 around PFR28_02476

Experiment: L-Phenylalanine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine 5 mM (C)
2,951,741	+		PFR28_02475	0.45	-2.7
2,951,741	+		PFR28_02475	0.45	-2.7
2,951,741	+		PFR28_02475	0.45	-4.5
2,951,741	+		PFR28_02475	0.45	-1.6
2,951,742	-		PFR28_02475	0.45	-3.9
2,951,742	-		PFR28_02475	0.45	-4.5
2,951,742	-		PFR28_02475	0.45	-2.6
2,951,795	+		PFR28_02475	0.50	-2.5
2,951,795	+		PFR28_02475	0.50	-1.0
2,951,795	+		PFR28_02475	0.50	-1.5
2,951,796	-		PFR28_02475	0.50	-3.2
2,951,796	-		PFR28_02475	0.50	-0.7
2,951,796	-		PFR28_02475	0.50	-2.9
2,951,811	-		PFR28_02475	0.52	-4.8
2,951,918	+		PFR28_02475	0.62	-3.3
2,951,918	+		PFR28_02475	0.62	-3.1
2,951,918	+		PFR28_02475	0.62	-2.9
2,951,918	+		PFR28_02475	0.62	-0.7
2,951,918	+		PFR28_02475	0.62	-2.4
2,951,918	+		PFR28_02475	0.62	-3.9
2,951,919	-		PFR28_02475	0.62	-3.0
2,951,919	-		PFR28_02475	0.62	-3.5
2,951,919	-		PFR28_02475	0.62	-2.5
2,951,928	+		PFR28_02475	0.63	-2.7
2,951,928	+		PFR28_02475	0.63	-2.2
2,951,928	+		PFR28_02475	0.63	-2.4
2,951,929	-		PFR28_02475	0.63	-2.2
2,951,954	+		PFR28_02475	0.65	-2.5
2,951,955	-		PFR28_02475	0.65	-2.3
2,951,955	-		PFR28_02475	0.65	-3.7
2,952,057	-		PFR28_02475	0.75	-2.9
2,952,125	+		PFR28_02475	0.81	-2.3
2,952,125	+		PFR28_02475	0.81	-3.1
2,952,125	+		PFR28_02475	0.81	-4.5
2,952,126	-		PFR28_02475	0.81	-2.2
2,952,126	-		PFR28_02475	0.81	-2.3
2,952,126	-		PFR28_02475	0.81	-3.5
2,952,126	-		PFR28_02475	0.81	-1.7
2,952,126	-		PFR28_02475	0.81	-3.4
2,952,317	+				-3.1
2,952,319	+				-2.3
2,952,319	+				-1.2
2,952,319	+				-1.2
2,952,319	+				-5.3
2,952,319	+				-2.9
2,952,319	+				-3.2
2,952,358	-				-4.2
2,952,358	-				-1.6
2,952,368	+				-1.2
2,952,411	+				-4.3
2,952,443	+				-0.7
2,952,444	-				-1.4
2,952,444	-				-0.2
2,952,444	-				-0.3
2,952,444	-				-2.2
2,952,455	-				-4.5
2,952,463	+				-2.0
2,952,463	+				+0.3
2,952,463	+				-1.5
2,952,463	+				-3.5
2,952,463	+				-3.5
2,952,463	+				-4.1
2,952,464	-				-2.2
2,952,464	-				-2.1
2,952,464	-				-4.5
2,952,464	-				-2.2
2,952,464	-				-1.0
2,952,464	-				-2.2
2,952,464	-				-2.0
2,952,464	-				-3.5
2,952,464	-				-2.7
2,952,526	+				-2.2
2,952,526	+				-4.0
2,952,526	+				-3.2
2,952,526	+				-3.6
2,952,527	-				+0.2
2,952,527	-				-0.1
2,952,527	-				-0.6
2,952,528	+				-2.3
2,952,528	+				-1.5
2,952,529	-				-0.6
2,952,545	+				+1.4
2,952,555	-				-0.7
2,952,578	-				+0.2
2,952,736	-		PFR28_02476	0.17	-0.6
2,952,775	+		PFR28_02476	0.21	+1.0
2,952,775	+		PFR28_02476	0.21	+0.3
2,952,787	+		PFR28_02476	0.22	-0.2
2,952,787	+		PFR28_02476	0.22	-0.7
2,952,787	+		PFR28_02476	0.22	+0.8
2,952,787	+		PFR28_02476	0.22	+0.8
2,952,787	+		PFR28_02476	0.22	+0.4
2,952,787	+		PFR28_02476	0.22	-1.4
2,952,787	+		PFR28_02476	0.22	-0.4
2,952,787	+		PFR28_02476	0.22	-2.3
2,952,788	-		PFR28_02476	0.22	-0.9
2,952,788	-		PFR28_02476	0.22	-0.6
2,952,788	-		PFR28_02476	0.22	-0.2
2,952,788	-		PFR28_02476	0.22	-2.0
2,952,788	-		PFR28_02476	0.22	-0.4
2,952,788	-		PFR28_02476	0.22	+0.8
2,952,788	-		PFR28_02476	0.22	+0.2
2,952,817	+		PFR28_02476	0.25	-1.9
2,952,818	-		PFR28_02476	0.25	+0.3
2,952,818	-		PFR28_02476	0.25	-0.2
2,952,818	-		PFR28_02476	0.25	-0.5
2,952,985	+		PFR28_02476	0.43	+0.7
2,952,985	+		PFR28_02476	0.43	-0.1
2,952,985	+		PFR28_02476	0.43	-0.2
2,952,985	+		PFR28_02476	0.43	+1.4
2,952,986	-		PFR28_02476	0.43	-0.9
2,952,986	-		PFR28_02476	0.43	-0.2
2,952,986	-		PFR28_02476	0.43	-0.2
2,952,986	-		PFR28_02476	0.43	+0.8
2,952,986	-		PFR28_02476	0.43	+0.9
2,952,986	-		PFR28_02476	0.43	+0.7
2,952,986	-		PFR28_02476	0.43	+0.4
2,952,986	-		PFR28_02476	0.43	+0.0
2,952,986	-		PFR28_02476	0.43	-0.2
2,952,989	+		PFR28_02476	0.43	-0.2
2,952,990	-		PFR28_02476	0.43	+0.2
2,953,104	+		PFR28_02476	0.56	+0.3
2,953,104	+		PFR28_02476	0.56	+0.4
2,953,104	+		PFR28_02476	0.56	+0.2
2,953,105	-		PFR28_02476	0.56	+0.1
2,953,105	-		PFR28_02476	0.56	+1.8
2,953,105	-		PFR28_02476	0.56	+0.8
2,953,105	-		PFR28_02476	0.56	+1.2
2,953,105	-		PFR28_02476	0.56	-0.6
2,953,105	-		PFR28_02476	0.56	-0.1
2,953,105	-		PFR28_02476	0.56	-0.9
2,953,222	+		PFR28_02476	0.68	+0.1
2,953,222	+		PFR28_02476	0.68	-0.7
2,953,222	+		PFR28_02476	0.68	+0.5
2,953,222	+		PFR28_02476	0.68	+1.3
2,953,223	-		PFR28_02476	0.68	-0.2
2,953,223	-		PFR28_02476	0.68	-0.6
2,953,223	-		PFR28_02476	0.68	+0.7
2,953,223	-		PFR28_02476	0.68	+0.4
2,953,252	+		PFR28_02476	0.71	+0.1
2,953,562	+				+0.8
2,953,590	-				+0.4
2,953,603	-				-0.1
2,953,712	-		PFR28_02477	0.12	-0.3
2,953,979	-		PFR28_02477	0.43	-0.4
2,954,247	+		PFR28_02477	0.74	-0.3
2,954,247	+		PFR28_02477	0.74	+0.7
2,954,247	+		PFR28_02477	0.74	+0.0
2,954,247	+		PFR28_02477	0.74	+0.5
2,954,247	+		PFR28_02477	0.74	+0.3
2,954,247	+		PFR28_02477	0.74	+0.1
2,954,247	+		PFR28_02477	0.74	-0.1
2,954,248	-		PFR28_02477	0.74	-0.5
2,954,248	-		PFR28_02477	0.74	+1.5
2,954,248	-		PFR28_02477	0.74	-0.5
2,954,248	-		PFR28_02477	0.74	-0.3
2,954,248	-		PFR28_02477	0.74	-0.2
2,954,248	-		PFR28_02477	0.74	+0.2
2,954,248	-		PFR28_02477	0.74	-0.3
2,954,248	-		PFR28_02477	0.74	+0.8
2,954,248	-		PFR28_02477	0.74	-1.7
2,954,253	-		PFR28_02477	0.75	+0.5
2,954,253	-		PFR28_02477	0.75	-1.6
2,954,358	+		PFR28_02477	0.87	+0.8
2,954,358	+		PFR28_02477	0.87	+0.4
2,954,358	+		PFR28_02477	0.87	+1.2
2,954,482	+				+0.4
2,954,483	-				-1.0
2,954,483	-				-1.0