Strain Fitness in Pseudomonas sp. RS175 around PFR28_02147

Experiment: L-Phenylalanine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine 5 mM (C)
2,467,803	+		PFR28_02146	0.51	-2.0
2,467,804	-		PFR28_02146	0.51	+0.9
2,467,804	-		PFR28_02146	0.51	-0.0
2,467,872	+		PFR28_02146	0.54	+1.7
2,467,872	+		PFR28_02146	0.54	-0.4
2,467,872	+		PFR28_02146	0.54	+0.2
2,467,873	-		PFR28_02146	0.54	-0.7
2,467,873	-		PFR28_02146	0.54	-0.8
2,467,873	-		PFR28_02146	0.54	-1.8
2,467,876	-		PFR28_02146	0.55	+0.7
2,467,884	+		PFR28_02146	0.55	-0.7
2,467,885	-		PFR28_02146	0.55	+0.8
2,467,885	-		PFR28_02146	0.55	-0.1
2,468,219	-		PFR28_02146	0.74	+0.2
2,468,376	+		PFR28_02146	0.82	+1.0
2,468,376	+		PFR28_02146	0.82	+1.0
2,468,377	-		PFR28_02146	0.82	-1.5
2,468,546	+				-0.3
2,468,546	+				-0.4
2,468,546	+				+2.1
2,468,547	-				-0.4
2,468,628	+				-0.9
2,468,629	-				+0.6
2,468,629	-				-0.1
2,468,673	-				-0.6
2,468,689	+				-1.6
2,468,690	-				-2.0
2,469,104	+		PFR28_02147	0.20	-0.0
2,469,167	+		PFR28_02147	0.23	-0.6
2,469,167	+		PFR28_02147	0.23	-1.4
2,469,167	+		PFR28_02147	0.23	-0.5
2,469,167	+		PFR28_02147	0.23	+1.0
2,469,168	-		PFR28_02147	0.23	+0.1
2,469,168	-		PFR28_02147	0.23	-1.2
2,469,168	-		PFR28_02147	0.23	-1.4
2,469,168	-		PFR28_02147	0.23	-0.4
2,469,168	-		PFR28_02147	0.23	-0.7
2,469,232	+		PFR28_02147	0.26	+1.0
2,469,233	-		PFR28_02147	0.26	-0.0
2,469,308	+		PFR28_02147	0.30	-0.5
2,469,308	+		PFR28_02147	0.30	-1.4
2,469,354	-		PFR28_02147	0.32	-2.0
2,469,507	-		PFR28_02147	0.39	+0.1
2,469,507	-		PFR28_02147	0.39	+0.3
2,469,507	-		PFR28_02147	0.39	-0.8
2,469,507	-		PFR28_02147	0.39	-2.0
2,469,734	+		PFR28_02147	0.50	+0.7
2,469,734	+		PFR28_02147	0.50	-1.4
2,469,734	+		PFR28_02147	0.50	+2.0
2,469,734	+		PFR28_02147	0.50	+1.0
2,469,734	+		PFR28_02147	0.50	-2.2
2,469,735	-		PFR28_02147	0.50	-1.5
2,469,735	-		PFR28_02147	0.50	+1.0
2,470,112	+		PFR28_02147	0.68	-0.3
2,470,113	-		PFR28_02147	0.68	-0.8
2,470,118	+		PFR28_02147	0.69	-0.0
2,470,118	+		PFR28_02147	0.69	+0.4
2,470,119	-		PFR28_02147	0.69	-1.4
2,470,119	-		PFR28_02147	0.69	+1.6
2,470,119	-		PFR28_02147	0.69	-1.6
2,470,476	+		PFR28_02147	0.86	+0.7
2,470,476	+		PFR28_02147	0.86	-1.2
2,470,476	+		PFR28_02147	0.86	-1.0
2,470,476	+		PFR28_02147	0.86	-0.6
2,470,476	+		PFR28_02147	0.86	-1.8
2,470,476	+		PFR28_02147	0.86	-0.6
2,470,477	-		PFR28_02147	0.86	-0.0
2,470,477	-		PFR28_02147	0.86	+0.2
2,470,477	-		PFR28_02147	0.86	-0.7
2,470,477	-		PFR28_02147	0.86	-1.6
2,470,726	-				+1.2
2,470,858	+				+0.5
2,470,858	+				-0.1
2,470,884	+				-1.2
2,470,884	+				-0.2
2,470,884	+				+0.1
2,470,885	-				-0.5
2,470,885	-				+0.2
2,470,885	-				-0.1
2,470,885	-				+0.2
2,470,888	+				+1.0
2,470,888	+				-1.7
2,470,888	+				-0.5
2,470,888	+				-0.4
2,470,889	-				-0.2
2,470,889	-				+0.8
2,470,889	-				-0.2
2,470,889	-				+0.0
2,470,889	-				-0.7
2,470,889	-				+0.9
2,470,889	-				-1.2
2,470,889	-				-0.0
2,470,933	+				+0.4
2,470,933	+				-1.8
2,471,229	+		PFR28_02148	0.17	-1.9
2,471,281	+		PFR28_02148	0.19	-0.6
2,471,281	+		PFR28_02148	0.19	+0.2
2,471,281	+		PFR28_02148	0.19	-0.6
2,471,281	+		PFR28_02148	0.19	+1.0
2,471,282	-		PFR28_02148	0.19	+0.0
2,471,282	-		PFR28_02148	0.19	-0.6
2,471,282	-		PFR28_02148	0.19	-0.2
2,471,315	-		PFR28_02148	0.20	-1.6
2,471,404	+		PFR28_02148	0.23	-0.3
2,471,404	+		PFR28_02148	0.23	+0.8
2,471,404	+		PFR28_02148	0.23	-0.6
2,471,405	-		PFR28_02148	0.23	+0.1
2,471,405	-		PFR28_02148	0.23	+0.7
2,471,405	-		PFR28_02148	0.23	+0.5
2,471,605	-		PFR28_02148	0.30	-0.6