Strain Fitness in Pseudomonas sp. RS175 around PFR28_03843

Experiment: L-Phenylalanine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine 5 mM (C)
4,418,560	+		PFR28_03842	0.76	-0.4
4,418,560	+		PFR28_03842	0.76	+0.2
4,418,560	+		PFR28_03842	0.76	+0.0
4,418,560	+		PFR28_03842	0.76	+0.2
4,418,560	+		PFR28_03842	0.76	+0.8
4,418,560	+		PFR28_03842	0.76	-0.2
4,418,560	+		PFR28_03842	0.76	+0.5
4,418,560	+		PFR28_03842	0.76	+0.5
4,418,561	-		PFR28_03842	0.76	+0.7
4,418,561	-		PFR28_03842	0.76	+0.4
4,418,561	-		PFR28_03842	0.76	+0.2
4,418,561	-		PFR28_03842	0.76	+1.3
4,418,561	-		PFR28_03842	0.76	-0.2
4,418,578	+		PFR28_03842	0.77	-0.2
4,418,578	+		PFR28_03842	0.77	+0.3
4,418,578	+		PFR28_03842	0.77	-0.7
4,418,578	+		PFR28_03842	0.77	+0.3
4,418,578	+		PFR28_03842	0.77	-0.7
4,418,578	+		PFR28_03842	0.77	-0.3
4,418,578	+		PFR28_03842	0.77	-0.6
4,418,579	-		PFR28_03842	0.77	-0.2
4,418,579	-		PFR28_03842	0.77	-0.1
4,418,579	-		PFR28_03842	0.77	-0.1
4,418,579	-		PFR28_03842	0.77	-0.4
4,418,579	-		PFR28_03842	0.77	+0.2
4,418,579	-		PFR28_03842	0.77	-0.5
4,418,605	+		PFR28_03842	0.78	+0.6
4,418,669	-		PFR28_03842	0.81	-0.2
4,418,669	-		PFR28_03842	0.81	-0.2
4,418,713	+		PFR28_03842	0.83	+0.9
4,418,713	+		PFR28_03842	0.83	+0.7
4,418,713	+		PFR28_03842	0.83	+0.1
4,418,713	+		PFR28_03842	0.83	-0.5
4,418,713	+		PFR28_03842	0.83	+0.5
4,418,713	+		PFR28_03842	0.83	-0.2
4,418,713	+		PFR28_03842	0.83	+0.7
4,418,713	+		PFR28_03842	0.83	-0.3
4,418,713	+		PFR28_03842	0.83	+0.4
4,418,713	+		PFR28_03842	0.83	-0.2
4,418,713	+		PFR28_03842	0.83	+0.4
4,418,713	+		PFR28_03842	0.83	+0.8
4,418,713	+		PFR28_03842	0.83	-0.2
4,418,713	+		PFR28_03842	0.83	-0.3
4,418,713	+		PFR28_03842	0.83	-0.7
4,418,714	-		PFR28_03842	0.83	+0.2
4,418,714	-		PFR28_03842	0.83	-0.3
4,418,714	-		PFR28_03842	0.83	-1.6
4,418,714	-		PFR28_03842	0.83	-0.3
4,418,714	-		PFR28_03842	0.83	-0.2
4,418,714	-		PFR28_03842	0.83	+0.1
4,418,714	-		PFR28_03842	0.83	+0.5
4,418,714	-		PFR28_03842	0.83	+0.5
4,418,714	-		PFR28_03842	0.83	+0.5
4,418,714	-		PFR28_03842	0.83	+0.2
4,418,714	-		PFR28_03842	0.83	-0.7
4,418,714	-		PFR28_03842	0.83	+1.2
4,418,714	-		PFR28_03842	0.83	+0.5
4,418,714	-		PFR28_03842	0.83	-0.3
4,418,714	-		PFR28_03842	0.83	+0.7
4,418,803	+		PFR28_03842	0.86	+0.1
4,418,803	+		PFR28_03842	0.86	+0.1
4,418,804	-		PFR28_03842	0.86	+0.3
4,418,804	-		PFR28_03842	0.86	-1.3
4,418,804	-		PFR28_03842	0.86	+1.0
4,418,804	-		PFR28_03842	0.86	+1.5
4,418,830	+		PFR28_03842	0.88	+0.7
4,418,882	-		PFR28_03842	0.90	-0.2
4,418,920	+				+1.1
4,419,127	+				+0.3
4,419,127	+				+0.6
4,419,127	+				+0.7
4,419,128	-				-0.8
4,419,128	-				+0.1
4,419,180	+				-0.2
4,419,181	-				-0.5
4,419,181	-				-0.6
4,419,181	-				-0.5
4,419,181	-				-0.2
4,419,186	+				+0.1
4,419,186	+				-0.4
4,419,186	+				+1.3
4,419,198	+				-0.1
4,419,205	+				-0.9
4,419,205	+				+1.2
4,419,205	+				+1.4
4,419,205	+				+2.0
4,419,205	+				+1.4
4,419,205	+				+0.4
4,419,205	+				+0.3
4,419,205	+				+1.7
4,419,205	+				+1.2
4,419,205	+				+0.3
4,419,206	-				-0.8
4,419,206	-				-0.4
4,419,206	-				+0.5
4,419,206	-				-0.7
4,419,206	-				-1.5
4,419,224	+				-0.4
4,419,224	+				+0.9
4,419,224	+				+0.9
4,419,224	+				+1.0
4,419,225	-				-1.6
4,419,225	-				-0.4
4,419,281	-				+0.0
4,419,312	+				-1.5
4,419,313	-				-2.1
4,419,400	+				+0.4
4,419,506	+				+0.0
4,419,506	+				+0.5
4,419,507	-				+0.2
4,419,507	-				+0.4
4,419,507	-				-1.8
4,419,507	-				+0.2
4,419,507	-				-0.1
4,419,535	+				-0.1
4,419,536	-				-0.9
4,419,536	-				-0.0
4,419,536	-				+0.3
4,419,536	-				-0.4
4,419,568	+				+0.1
4,419,568	+				+0.7
4,419,587	+				-0.5
4,419,587	+				-2.5
4,419,587	+				-3.8
4,419,587	+				-3.4
4,419,587	+				-2.8
4,419,587	+				-3.2
4,419,587	+				-3.5
4,419,591	+				+1.0
4,419,591	+				-4.4
4,419,591	+				-0.5
4,419,591	+				-2.1
4,419,591	+				-1.4
4,419,591	+				-0.7
4,419,591	+				-2.2
4,419,663	-		PFR28_03843	0.13	-1.5
4,420,146	+		PFR28_03843	0.72	-2.4
4,420,147	-		PFR28_03843	0.72	-0.6
4,420,147	-		PFR28_03843	0.72	+0.5
4,420,147	-		PFR28_03843	0.72	-1.1
4,420,148	+		PFR28_03843	0.72	-2.5
4,420,176	-		PFR28_03843	0.75	-0.5
4,420,200	+		PFR28_03843	0.78	-3.8
4,420,200	+		PFR28_03843	0.78	-3.7
4,420,200	+		PFR28_03843	0.78	-2.5
4,420,200	+		PFR28_03843	0.78	-2.8
4,420,200	+		PFR28_03843	0.78	-3.5
4,420,201	-		PFR28_03843	0.78	-5.1
4,420,201	-		PFR28_03843	0.78	-5.0
4,420,201	-		PFR28_03843	0.78	-3.6
4,420,201	-		PFR28_03843	0.78	-3.6
4,420,293	+		PFR28_03843	0.89	-3.3
4,420,293	+		PFR28_03843	0.89	-2.9
4,420,294	-		PFR28_03843	0.90	-2.6
4,420,294	-		PFR28_03843	0.90	-2.9
4,420,377	+				+1.1
4,420,377	+				-0.2
4,420,377	+				-1.0
4,420,377	+				-0.7
4,420,378	-				+2.5
4,420,404	+				-1.8
4,420,404	+				-0.7
4,420,404	+				-1.6
4,420,405	-				+0.5
4,420,405	-				-0.5
4,420,405	-				+1.7
4,420,405	-				+0.5
4,420,405	-				-1.8
4,420,415	+				-1.9
4,420,437	+				-4.0
4,420,437	+				-0.5
4,420,460	+		PFR28_03844	0.10	-3.3
4,420,460	+		PFR28_03844	0.10	-3.5
4,420,574	+		PFR28_03844	0.28	-3.2
4,420,763	+		PFR28_03844	0.58	-3.8
4,420,763	+		PFR28_03844	0.58	-2.1
4,420,763	+		PFR28_03844	0.58	-3.7
4,420,763	+		PFR28_03844	0.58	-3.2
4,420,763	+		PFR28_03844	0.58	-0.5
4,420,763	+		PFR28_03844	0.58	-1.5
4,420,763	+		PFR28_03844	0.58	-2.9
4,420,763	+		PFR28_03844	0.58	-2.8
4,420,763	+		PFR28_03844	0.58	-0.5
4,420,763	+		PFR28_03844	0.58	-2.1
4,420,858	+		PFR28_03844	0.74	-2.5