Strain Fitness in Pseudomonas sp. RS175 around PFR28_02473

Experiment: L-Phenylalanine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine 5 mM (C)
2,948,085	+		PFR28_02472	0.33	+0.3
2,948,086	-		PFR28_02472	0.33	+0.1
2,948,086	-		PFR28_02472	0.33	+1.1
2,948,093	+		PFR28_02472	0.34	-0.3
2,948,093	+		PFR28_02472	0.34	-0.4
2,948,093	+		PFR28_02472	0.34	+0.3
2,948,094	-		PFR28_02472	0.34	-1.1
2,948,097	+		PFR28_02472	0.34	+0.2
2,948,097	+		PFR28_02472	0.34	-0.3
2,948,097	+		PFR28_02472	0.34	-1.3
2,948,097	+		PFR28_02472	0.34	-0.5
2,948,097	+		PFR28_02472	0.34	-0.7
2,948,097	+		PFR28_02472	0.34	+0.6
2,948,097	+		PFR28_02472	0.34	-0.3
2,948,097	+		PFR28_02472	0.34	-0.4
2,948,097	+		PFR28_02472	0.34	-0.1
2,948,097	+		PFR28_02472	0.34	-0.3
2,948,097	+		PFR28_02472	0.34	-0.9
2,948,097	+		PFR28_02472	0.34	+0.2
2,948,097	+		PFR28_02472	0.34	+0.2
2,948,097	+		PFR28_02472	0.34	-0.4
2,948,097	+		PFR28_02472	0.34	-0.6
2,948,098	-		PFR28_02472	0.34	+0.3
2,948,098	-		PFR28_02472	0.34	+1.1
2,948,098	-		PFR28_02472	0.34	-0.6
2,948,098	-		PFR28_02472	0.34	+0.2
2,948,098	-		PFR28_02472	0.34	+1.7
2,948,098	-		PFR28_02472	0.34	+1.2
2,948,098	-		PFR28_02472	0.34	-0.8
2,948,098	-		PFR28_02472	0.34	-0.8
2,948,098	-		PFR28_02472	0.34	+0.6
2,948,098	-		PFR28_02472	0.34	+0.7
2,948,098	-		PFR28_02472	0.34	-1.1
2,948,098	-		PFR28_02472	0.34	-0.2
2,948,098	-		PFR28_02472	0.34	+0.3
2,948,098	-		PFR28_02472	0.34	+0.9
2,948,098	-		PFR28_02472	0.34	+0.5
2,948,098	-		PFR28_02472	0.34	+0.9
2,948,098	-		PFR28_02472	0.34	+0.3
2,948,101	-		PFR28_02472	0.35	-0.3
2,948,101	-		PFR28_02472	0.35	-0.5
2,948,202	+		PFR28_02472	0.45	+0.4
2,948,203	-		PFR28_02472	0.45	-0.7
2,948,283	+		PFR28_02472	0.53	-0.5
2,948,283	+		PFR28_02472	0.53	+1.6
2,948,284	-		PFR28_02472	0.53	-0.8
2,948,337	+		PFR28_02472	0.58	+1.5
2,948,338	-		PFR28_02472	0.58	-0.9
2,948,394	+		PFR28_02472	0.64	-0.4
2,948,394	+		PFR28_02472	0.64	+0.4
2,948,394	+		PFR28_02472	0.64	-0.2
2,948,394	+		PFR28_02472	0.64	+1.2
2,948,394	+		PFR28_02472	0.64	-0.3
2,948,394	+		PFR28_02472	0.64	+0.3
2,948,395	-		PFR28_02472	0.64	-0.6
2,948,395	-		PFR28_02472	0.64	-1.0
2,948,395	-		PFR28_02472	0.64	+0.4
2,948,395	-		PFR28_02472	0.64	-0.7
2,948,395	-		PFR28_02472	0.64	-0.6
2,948,508	+		PFR28_02472	0.75	+0.5
2,948,508	+		PFR28_02472	0.75	-0.7
2,948,508	+		PFR28_02472	0.75	+0.4
2,948,509	-		PFR28_02472	0.75	-0.2
2,948,509	-		PFR28_02472	0.75	+0.3
2,948,509	-		PFR28_02472	0.75	+0.6
2,948,509	-		PFR28_02472	0.75	+1.1
2,948,509	-		PFR28_02472	0.75	+1.6
2,948,509	-		PFR28_02472	0.75	+0.6
2,948,509	-		PFR28_02472	0.75	+1.0
2,948,622	+		PFR28_02472	0.86	-1.4
2,948,623	-		PFR28_02472	0.86	+0.1
2,948,623	-		PFR28_02472	0.86	-0.1
2,948,623	-		PFR28_02472	0.86	-1.4
2,948,623	-		PFR28_02472	0.86	-0.1
2,948,623	-		PFR28_02472	0.86	+0.1
2,948,760	+				-0.7
2,948,760	+				-0.8
2,948,761	-				+1.2
2,948,761	-				+1.1
2,948,761	-				-0.6
2,948,761	-				-0.7
2,948,875	+				+1.3
2,948,875	+				-0.7
2,948,875	+				+0.1
2,948,875	+				-0.5
2,948,876	-				-0.4
2,948,876	-				+0.1
2,948,876	-				+0.0
2,948,876	-				-0.6
2,948,914	-				-0.7
2,948,914	-				-0.6
2,948,979	+				+0.1
2,948,979	+				+0.2
2,948,979	+				-0.0
2,948,979	+				+0.2
2,948,979	+				-0.1
2,948,979	+				+0.7
2,948,979	+				+0.1
2,948,979	+				-0.3
2,948,979	+				+0.7
2,948,979	+				+0.7
2,948,979	+				+1.5
2,948,979	+				+0.3
2,948,980	-				-1.7
2,948,980	-				-0.1
2,948,980	-				-0.4
2,948,980	-				-1.5
2,948,980	-				-0.3
2,948,980	-				-0.3
2,948,980	-				-0.3
2,948,980	-				+0.6
2,948,980	-				-1.2
2,948,980	-				+0.4
2,948,980	-				-0.5
2,948,982	+				-0.3
2,948,982	+				-3.3
2,948,982	+				-0.3
2,948,982	+				+0.5
2,948,982	+				+0.3
2,948,983	-				+0.2
2,948,983	-				-1.0
2,948,983	-				+1.1
2,948,983	-				-0.8
2,948,983	-				-0.0
2,948,985	+				-0.9
2,948,985	+				-3.0
2,948,985	+				+0.6
2,948,985	+				-0.4
2,948,985	+				-0.3
2,948,985	+				-1.3
2,948,985	+				+0.6
2,948,985	+				+0.4
2,948,986	-				+0.7
2,948,986	-				+0.4
2,948,986	-				-0.6
2,948,986	-				-1.0
2,949,226	+		PFR28_02473	0.34	+1.0
2,949,226	+		PFR28_02473	0.34	+0.9
2,949,227	-		PFR28_02473	0.34	-0.8
2,949,237	+		PFR28_02473	0.35	+0.6
2,949,238	-		PFR28_02473	0.35	-0.3
2,949,300	+		PFR28_02473	0.42	+0.4
2,949,300	+		PFR28_02473	0.42	+0.4
2,949,300	+		PFR28_02473	0.42	-0.1
2,949,300	+		PFR28_02473	0.42	+0.4
2,949,355	-		PFR28_02473	0.49	-0.4
2,949,412	-		PFR28_02473	0.55	+0.1
2,949,412	-		PFR28_02473	0.55	+0.1
2,949,603	+		PFR28_02473	0.77	+1.2
2,949,603	+		PFR28_02473	0.77	-0.0
2,949,603	+		PFR28_02473	0.77	+0.7
2,949,603	+		PFR28_02473	0.77	-0.6
2,949,603	+		PFR28_02473	0.77	+0.7
2,949,604	-		PFR28_02473	0.77	-0.3
2,949,604	-		PFR28_02473	0.77	-0.3
2,949,604	-		PFR28_02473	0.77	-0.2
2,949,604	-		PFR28_02473	0.77	+0.0
2,949,654	+		PFR28_02473	0.82	+0.3
2,949,654	+		PFR28_02473	0.82	-0.6
2,949,654	+		PFR28_02473	0.82	+0.1
2,949,654	+		PFR28_02473	0.82	+0.0
2,949,655	-		PFR28_02473	0.82	-0.6
2,949,655	-		PFR28_02473	0.82	-0.4
2,949,655	-		PFR28_02473	0.82	+0.7
2,949,655	-		PFR28_02473	0.82	+0.9
2,949,670	+		PFR28_02473	0.84	-0.4
2,949,670	+		PFR28_02473	0.84	+0.2
2,949,670	+		PFR28_02473	0.84	+0.7
2,949,671	-		PFR28_02473	0.84	+2.7
2,949,671	-		PFR28_02473	0.84	+1.3
2,949,671	-		PFR28_02473	0.84	-0.8
2,949,729	+				-0.2
2,949,729	+				+0.5
2,949,729	+				-0.5
2,949,729	+				+0.3
2,949,729	+				-1.1
2,949,729	+				-0.3
2,949,729	+				+0.8
2,949,729	+				-0.7
2,949,729	+				+0.1
2,949,730	-				-0.8
2,949,730	-				+0.4
2,949,730	-				-0.3
2,949,730	-				-0.1
2,949,730	-				-0.8
2,949,730	-				+0.1
2,949,730	-				-0.5
2,949,730	-				+0.2
2,949,730	-				+0.9
2,949,730	-				-1.3
2,949,812	+				+0.3
2,949,812	+				-0.0
2,949,812	+				-0.6
2,949,812	+				+0.4
2,949,812	+				+0.4
2,949,812	+				-0.1
2,949,812	+				-1.3
2,949,812	+				-1.1
2,949,813	-				-0.3
2,949,813	-				-1.5
2,949,813	-				-1.4
2,949,813	-				-1.1
2,949,855	-				-1.2
2,949,855	-				-0.8
2,949,855	-				+0.1
2,949,855	-				-1.7