Strain Fitness in Pseudomonas sp. RS175 around PFR28_02146

Experiment: L-tyrosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine 5 mM (C)
2,465,944	+		PFR28_02145	0.40	-1.3
2,465,944	+		PFR28_02145	0.40	-1.6
2,465,944	+		PFR28_02145	0.40	-1.4
2,465,944	+		PFR28_02145	0.40	-2.2
2,465,945	-		PFR28_02145	0.40	-1.8
2,466,062	-		PFR28_02145	0.48	-1.3
2,466,094	+		PFR28_02145	0.50	-1.3
2,466,094	+		PFR28_02145	0.50	-1.3
2,466,094	+		PFR28_02145	0.50	+0.6
2,466,094	+		PFR28_02145	0.50	-0.5
2,466,094	+		PFR28_02145	0.50	+0.1
2,466,094	+		PFR28_02145	0.50	-1.4
2,466,095	-		PFR28_02145	0.50	-1.8
2,466,095	-		PFR28_02145	0.50	-1.0
2,466,095	-		PFR28_02145	0.50	-1.1
2,466,095	-		PFR28_02145	0.50	-0.9
2,466,287	+		PFR28_02145	0.62	-1.5
2,466,287	+		PFR28_02145	0.62	-1.3
2,466,287	+		PFR28_02145	0.62	-1.6
2,466,287	+		PFR28_02145	0.62	-1.8
2,466,287	+		PFR28_02145	0.62	-1.4
2,466,287	+		PFR28_02145	0.62	-0.1
2,466,288	-		PFR28_02145	0.62	-2.4
2,466,288	-		PFR28_02145	0.62	-1.6
2,466,288	-		PFR28_02145	0.62	-1.3
2,466,288	-		PFR28_02145	0.62	-2.6
2,466,288	-		PFR28_02145	0.62	-1.4
2,466,353	-		PFR28_02145	0.66	-0.9
2,466,571	+		PFR28_02145	0.80	-1.4
2,466,571	+		PFR28_02145	0.80	-1.5
2,466,572	-		PFR28_02145	0.80	+0.5
2,466,598	+		PFR28_02145	0.82	-1.3
2,466,598	+		PFR28_02145	0.82	-0.6
2,466,598	+		PFR28_02145	0.82	-0.4
2,466,598	+		PFR28_02145	0.82	-1.8
2,466,599	-		PFR28_02145	0.82	-1.7
2,466,599	-		PFR28_02145	0.82	-1.0
2,466,599	-		PFR28_02145	0.82	-2.0
2,466,599	-		PFR28_02145	0.82	-1.7
2,466,599	-		PFR28_02145	0.82	-1.3
2,466,599	-		PFR28_02145	0.82	-0.6
2,466,599	-		PFR28_02145	0.82	-1.6
2,466,599	-		PFR28_02145	0.82	-1.6
2,466,599	-		PFR28_02145	0.82	-1.5
2,466,709	+		PFR28_02145	0.89	-1.1
2,466,709	+		PFR28_02145	0.89	-0.8
2,466,709	+		PFR28_02145	0.89	-1.2
2,466,709	+		PFR28_02145	0.89	-2.0
2,466,710	-		PFR28_02145	0.89	-1.4
2,466,710	-		PFR28_02145	0.89	-1.7
2,466,823	+				-1.8
2,466,836	-				-1.3
2,466,836	-				-1.4
2,466,864	+				+0.1
2,466,865	-				-1.4
2,466,865	-				-0.4
2,466,984	+				+0.4
2,466,984	+				+0.9
2,467,165	+		PFR28_02146	0.15	+0.0
2,467,165	+		PFR28_02146	0.15	+0.6
2,467,165	+		PFR28_02146	0.15	-0.7
2,467,166	-		PFR28_02146	0.15	-0.4
2,467,166	-		PFR28_02146	0.15	-1.6
2,467,166	-		PFR28_02146	0.15	-0.8
2,467,185	+		PFR28_02146	0.16	-0.2
2,467,185	+		PFR28_02146	0.16	-1.0
2,467,185	+		PFR28_02146	0.16	+0.7
2,467,185	+		PFR28_02146	0.16	-1.3
2,467,185	+		PFR28_02146	0.16	-0.9
2,467,224	+		PFR28_02146	0.18	+0.5
2,467,225	-		PFR28_02146	0.19	+1.5
2,467,239	+		PFR28_02146	0.19	+0.1
2,467,239	+		PFR28_02146	0.19	-0.4
2,467,239	+		PFR28_02146	0.19	-1.4
2,467,239	+		PFR28_02146	0.19	+0.9
2,467,240	-		PFR28_02146	0.19	-0.5
2,467,240	-		PFR28_02146	0.19	+0.3
2,467,240	-		PFR28_02146	0.19	-0.7
2,467,240	-		PFR28_02146	0.19	-1.1
2,467,240	-		PFR28_02146	0.19	-0.9
2,467,371	+		PFR28_02146	0.27	+0.6
2,467,390	-		PFR28_02146	0.28	-0.4
2,467,407	+		PFR28_02146	0.29	-0.8
2,467,408	-		PFR28_02146	0.29	-0.4
2,467,485	+		PFR28_02146	0.33	-0.5
2,467,485	+		PFR28_02146	0.33	+0.8
2,467,485	+		PFR28_02146	0.33	-0.9
2,467,485	+		PFR28_02146	0.33	-0.8
2,467,486	-		PFR28_02146	0.33	+0.3
2,467,512	+		PFR28_02146	0.34	-0.6
2,467,512	+		PFR28_02146	0.34	+0.0
2,467,513	-		PFR28_02146	0.34	-0.7
2,467,513	-		PFR28_02146	0.34	+0.2
2,467,513	-		PFR28_02146	0.34	+0.1
2,467,513	-		PFR28_02146	0.34	+0.3
2,467,641	+		PFR28_02146	0.42	+1.2
2,467,803	+		PFR28_02146	0.51	-0.7
2,467,804	-		PFR28_02146	0.51	+0.7
2,467,804	-		PFR28_02146	0.51	+0.7
2,467,872	+		PFR28_02146	0.54	+1.1
2,467,872	+		PFR28_02146	0.54	-0.8
2,467,872	+		PFR28_02146	0.54	-0.2
2,467,873	-		PFR28_02146	0.54	+0.2
2,467,873	-		PFR28_02146	0.54	-0.8
2,467,873	-		PFR28_02146	0.54	-0.8
2,467,876	-		PFR28_02146	0.55	+0.4
2,467,884	+		PFR28_02146	0.55	-1.2
2,467,885	-		PFR28_02146	0.55	-0.7
2,467,885	-		PFR28_02146	0.55	+0.0
2,468,219	-		PFR28_02146	0.74	-0.2
2,468,376	+		PFR28_02146	0.82	+0.9
2,468,376	+		PFR28_02146	0.82	-0.1
2,468,377	-		PFR28_02146	0.82	-0.8
2,468,546	+				-0.3
2,468,546	+				+0.5
2,468,546	+				+2.2
2,468,547	-				-1.4
2,468,628	+				+0.3
2,468,629	-				+0.7
2,468,629	-				-0.5
2,468,673	-				-1.0
2,468,689	+				-1.3
2,468,690	-				-0.2
2,469,104	+		PFR28_02147	0.20	+0.5
2,469,167	+		PFR28_02147	0.23	-0.3
2,469,167	+		PFR28_02147	0.23	-0.8
2,469,167	+		PFR28_02147	0.23	-0.9
2,469,167	+		PFR28_02147	0.23	+0.9
2,469,168	-		PFR28_02147	0.23	+0.0
2,469,168	-		PFR28_02147	0.23	-1.2
2,469,168	-		PFR28_02147	0.23	-2.0
2,469,168	-		PFR28_02147	0.23	+0.1
2,469,168	-		PFR28_02147	0.23	-0.9
2,469,232	+		PFR28_02147	0.26	-0.1
2,469,233	-		PFR28_02147	0.26	-0.4
2,469,308	+		PFR28_02147	0.30	-0.2
2,469,308	+		PFR28_02147	0.30	-0.3
2,469,354	-		PFR28_02147	0.32	-0.3
2,469,507	-		PFR28_02147	0.39	-0.3
2,469,507	-		PFR28_02147	0.39	+0.9
2,469,507	-		PFR28_02147	0.39	-1.2
2,469,507	-		PFR28_02147	0.39	+0.2