Strain Fitness in Pseudomonas sp. RS175 around PFR28_02989

Experiment: mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM
3,492,656	+				+0.9
3,492,656	+				-0.4
3,492,656	+				+0.1
3,492,657	-				-1.5
3,492,657	-				+0.2
3,492,750	+				+0.1
3,492,750	+				+0.6
3,492,750	+				+0.6
3,492,751	-				-0.3
3,492,751	-				+0.3
3,492,751	-				+0.2
3,492,752	+				+0.4
3,492,752	+				-0.0
3,492,752	+				+0.1
3,492,780	+				+0.0
3,492,780	+				+0.0
3,492,780	+				+0.5
3,492,780	+				-0.1
3,492,781	-				-0.4
3,492,781	-				+0.6
3,492,781	-				-0.1
3,492,782	+				+1.3
3,492,782	+				-0.3
3,492,786	+				+0.5
3,492,787	-				-0.5
3,492,797	+				-0.7
3,492,797	+				-0.4
3,492,798	-				-0.0
3,492,798	-				-0.3
3,492,799	+				+0.9
3,492,799	+				-0.5
3,492,799	+				+0.4
3,492,799	+				-0.3
3,492,799	+				+0.9
3,492,800	-				+0.2
3,492,800	-				-1.0
3,492,800	-				+0.1
3,492,800	-				-0.3
3,492,801	+				-0.8
3,492,802	-				+0.5
3,492,808	-				-0.3
3,492,808	-				-0.2
3,492,850	+				-0.0
3,492,850	+				-0.3
3,492,850	+				-0.4
3,492,850	+				+0.7
3,492,851	-				+0.3
3,492,893	+				-0.3
3,492,893	+				+0.8
3,493,230	+		PFR28_02988	0.53	+0.4
3,493,230	+		PFR28_02988	0.53	-0.1
3,493,249	+		PFR28_02988	0.56	+0.3
3,493,446	+		PFR28_02988	0.87	+0.1
3,493,465	-				+0.2
3,493,518	+				+0.1
3,493,518	+				+1.4
3,493,518	+				+0.7
3,493,518	+				+0.4
3,493,518	+				+1.9
3,493,518	+				+0.1
3,493,518	+				-0.4
3,493,518	+				+0.8
3,493,518	+				+1.6
3,493,518	+				-0.6
3,493,518	+				-0.4
3,493,518	+				-1.4
3,493,519	-				-1.6
3,493,519	-				-0.6
3,493,519	-				-1.2
3,493,519	-				-0.0
3,493,519	-				-1.2
3,493,519	-				-1.1
3,493,519	-				-0.4
3,493,519	-				-2.2
3,493,519	-				-0.4
3,493,620	+		PFR28_02989	0.18	+1.0
3,493,620	+		PFR28_02989	0.18	-1.1
3,493,620	+		PFR28_02989	0.18	-0.8
3,493,621	-		PFR28_02989	0.18	+0.6
3,493,621	-		PFR28_02989	0.18	-0.1
3,493,621	-		PFR28_02989	0.18	-0.1
3,493,621	-		PFR28_02989	0.18	-0.0
3,493,621	-		PFR28_02989	0.18	+0.9
3,493,755	+		PFR28_02989	0.46	-0.4
3,493,755	+		PFR28_02989	0.46	-0.4
3,493,755	+		PFR28_02989	0.46	+1.1
3,493,755	+		PFR28_02989	0.46	-0.4
3,493,755	+		PFR28_02989	0.46	+0.6
3,493,755	+		PFR28_02989	0.46	-0.8
3,493,756	-		PFR28_02989	0.46	+1.2
3,493,756	-		PFR28_02989	0.46	-0.6
3,493,756	-		PFR28_02989	0.46	+0.2
3,493,756	-		PFR28_02989	0.46	-0.1
3,493,756	-		PFR28_02989	0.46	-0.8
3,493,756	-		PFR28_02989	0.46	-1.0
3,493,756	-		PFR28_02989	0.46	-0.2
3,493,771	-		PFR28_02989	0.49	+0.7
3,493,800	+		PFR28_02989	0.55	-1.0
3,493,800	+		PFR28_02989	0.55	-0.4
3,493,800	+		PFR28_02989	0.55	-0.0
3,493,800	+		PFR28_02989	0.55	-0.0
3,493,800	+		PFR28_02989	0.55	+0.0
3,493,800	+		PFR28_02989	0.55	-0.3
3,493,801	-		PFR28_02989	0.56	-1.1
3,493,801	-		PFR28_02989	0.56	-1.4
3,493,938	+		PFR28_02989	0.84	-1.2
3,494,027	+				-0.1
3,494,027	+				-0.4
3,494,027	+				+0.1
3,494,046	+				-0.4
3,494,047	-				-0.8
3,494,047	-				-0.2
3,494,049	+				-1.5
3,494,049	+				-0.1
3,494,049	+				-0.3
3,494,049	+				-0.7
3,494,049	+				+0.7
3,494,049	+				-0.1
3,494,049	+				+0.1
3,494,049	+				+0.1
3,494,049	+				-0.1
3,494,049	+				+0.7
3,494,050	-				+0.7
3,494,050	-				+1.1
3,494,050	-				-0.2
3,494,050	-				+0.2
3,494,158	+				-0.3
3,494,159	-				+0.0
3,494,279	+		PFR28_02990	0.28	-1.0
3,494,280	-		PFR28_02990	0.28	-0.4
3,494,280	-		PFR28_02990	0.28	+0.1
3,494,581	+				-1.7
3,494,581	+				-0.1
3,494,581	+				-0.4
3,494,582	-				-2.9
3,494,582	-				+0.7
3,494,582	-				-0.6
3,494,582	-				+0.5
3,494,582	-				-0.5
3,494,582	-				-0.2
3,494,626	+		PFR28_02991	0.18	+0.3
3,494,626	+		PFR28_02991	0.18	-0.3
3,494,626	+		PFR28_02991	0.18	+0.1
3,494,626	+		PFR28_02991	0.18	+0.6
3,494,626	+		PFR28_02991	0.18	-1.4
3,494,627	-		PFR28_02991	0.18	+0.6
3,494,627	-		PFR28_02991	0.18	-0.5
3,494,627	-		PFR28_02991	0.18	-0.6
3,494,627	-		PFR28_02991	0.18	-0.6
3,494,627	-		PFR28_02991	0.18	+0.0
3,494,627	-		PFR28_02991	0.18	+0.4
3,494,935	+				+0.2
3,494,935	+				+0.2
3,494,936	-				-0.4
3,494,936	-				-0.1