Strain Fitness in Pseudomonas sp. RS175 around PFR28_01525

Experiment: mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM
1,672,589	-		PFR28_01523	0.80	-0.5
1,672,617	+		PFR28_01523	0.82	-0.4
1,672,623	+		PFR28_01523	0.82	+0.2
1,672,623	+		PFR28_01523	0.82	+0.4
1,672,624	-		PFR28_01523	0.82	-0.4
1,672,624	-		PFR28_01523	0.82	+0.1
1,672,694	+		PFR28_01523	0.87	+0.5
1,672,816	+				+0.3
1,672,816	+				+0.3
1,672,816	+				-0.3
1,672,817	-				-0.2
1,672,874	+				-0.8
1,672,874	+				-1.0
1,672,874	+				+0.2
1,672,875	-				-1.7
1,672,975	+				-0.2
1,672,976	-				-0.1
1,673,002	+				-0.7
1,673,067	+				+1.1
1,673,067	+				-0.0
1,673,074	+				+0.4
1,673,082	+				+0.2
1,673,266	-		PFR28_01524	0.56	+0.5
1,673,303	-		PFR28_01524	0.70	-0.3
1,673,303	-		PFR28_01524	0.70	-0.8
1,673,309	+		PFR28_01524	0.72	+0.6
1,673,309	+		PFR28_01524	0.72	+0.1
1,673,310	-		PFR28_01524	0.73	+0.4
1,673,491	-				-0.6
1,673,538	+		PFR28_01525	0.11	+0.5
1,673,538	+		PFR28_01525	0.11	+0.3
1,673,847	+		PFR28_01525	0.40	-0.3
1,673,880	+		PFR28_01525	0.44	-0.3
1,673,881	-		PFR28_01525	0.44	+0.4
1,673,920	+		PFR28_01525	0.47	+0.1
1,673,920	+		PFR28_01525	0.47	+0.0
1,673,921	-		PFR28_01525	0.48	-0.3
1,673,921	-		PFR28_01525	0.48	-0.3
1,674,003	+		PFR28_01525	0.55	+1.0
1,674,067	+		PFR28_01525	0.61	-0.8
1,674,067	+		PFR28_01525	0.61	+0.4
1,674,067	+		PFR28_01525	0.61	-0.7
1,674,259	+		PFR28_01525	0.80	+1.5
1,674,259	+		PFR28_01525	0.80	-0.4
1,674,260	-		PFR28_01525	0.80	-0.7
1,674,296	-		PFR28_01525	0.83	+0.6
1,674,332	-		PFR28_01525	0.87	+0.1
1,674,334	+		PFR28_01525	0.87	+0.4
1,674,334	+		PFR28_01525	0.87	-0.1
1,674,335	-		PFR28_01525	0.87	+1.5
1,674,460	+				-0.1
1,674,550	+				-0.4
1,674,550	+				-0.3
1,674,550	+				+0.7
1,674,550	+				+0.7
1,674,550	+				+0.6
1,674,658	+				-0.4
1,674,820	+		PFR28_01526	0.21	-0.3
1,674,821	-		PFR28_01526	0.21	-0.3
1,674,821	-		PFR28_01526	0.21	+0.0
1,674,835	-		PFR28_01526	0.23	-0.5
1,674,904	+		PFR28_01526	0.28	+0.6
1,674,905	-		PFR28_01526	0.28	+1.7
1,674,905	-		PFR28_01526	0.28	-0.4
1,674,905	-		PFR28_01526	0.28	+0.7
1,674,922	+		PFR28_01526	0.29	-1.0
1,674,922	+		PFR28_01526	0.29	+1.1
1,674,923	-		PFR28_01526	0.29	-0.2
1,675,318	+		PFR28_01526	0.59	+0.1
1,675,318	+		PFR28_01526	0.59	-0.1
1,675,446	+		PFR28_01526	0.68	+0.9