Experiment: Matrix:KB soft agar;Phage:PBS;Temp:28;Samp:32-9
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_08400 and OLJFJH_08405 are separated by 550 nucleotides OLJFJH_08405 and OLJFJH_08410 are separated by 201 nucleotides OLJFJH_08410 and OLJFJH_08415 are separated by 88 nucleotides
OLJFJH_08400: OLJFJH_08400 - hypothetical protein, at 1,727,843 to 1,728,160
_08400
OLJFJH_08405: OLJFJH_08405 - hypothetical protein, at 1,728,711 to 1,729,094
_08405
OLJFJH_08410: OLJFJH_08410 - hypothetical protein, at 1,729,296 to 1,729,472
_08410
OLJFJH_08415: OLJFJH_08415 - hypothetical protein, at 1,729,561 to 1,730,589
_08415
Position (kb) 1728
1729
1730 Strain fitness (log2 ratio) -2
-1
0
1 at 1727.735 kb on + strand at 1727.736 kb on - strand at 1727.969 kb on - strand, within OLJFJH_08400 at 1727.970 kb on + strand, within OLJFJH_08400 at 1728.053 kb on + strand, within OLJFJH_08400 at 1728.158 kb on + strand at 1728.463 kb on + strand at 1728.617 kb on + strand at 1728.623 kb on + strand at 1728.624 kb on - strand at 1728.624 kb on - strand at 1728.625 kb on + strand at 1728.713 kb on - strand at 1728.754 kb on + strand, within OLJFJH_08405 at 1728.836 kb on + strand, within OLJFJH_08405 at 1728.857 kb on - strand, within OLJFJH_08405 at 1729.079 kb on + strand at 1729.126 kb on + strand at 1729.181 kb on + strand at 1729.260 kb on - strand at 1729.378 kb on + strand, within OLJFJH_08410 at 1729.379 kb on - strand, within OLJFJH_08410 at 1729.443 kb on + strand, within OLJFJH_08410 at 1729.468 kb on + strand at 1729.583 kb on + strand at 1729.692 kb on - strand, within OLJFJH_08415 at 1730.072 kb on + strand, within OLJFJH_08415 at 1730.077 kb on + strand, within OLJFJH_08415
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:PBS;Temp:28;Samp:32-9 remove 1,727,735 + -0.0 1,727,736 - -1.1 1,727,969 - OLJFJH_08400 0.40 -0.9 1,727,970 + OLJFJH_08400 0.40 +0.6 1,728,053 + OLJFJH_08400 0.66 +0.2 1,728,158 + -0.4 1,728,463 + -0.1 1,728,617 + +0.1 1,728,623 + +0.6 1,728,624 - +0.0 1,728,624 - -0.8 1,728,625 + -0.6 1,728,713 - +0.2 1,728,754 + OLJFJH_08405 0.11 -1.1 1,728,836 + OLJFJH_08405 0.33 -0.0 1,728,857 - OLJFJH_08405 0.38 -2.2 1,729,079 + -1.3 1,729,126 + -2.1 1,729,181 + -0.5 1,729,260 - -0.0 1,729,378 + OLJFJH_08410 0.46 +0.2 1,729,379 - OLJFJH_08410 0.47 -0.1 1,729,443 + OLJFJH_08410 0.83 -0.2 1,729,468 + +1.5 1,729,583 + -0.0 1,729,692 - OLJFJH_08415 0.13 -0.1 1,730,072 + OLJFJH_08415 0.50 -0.1 1,730,077 + OLJFJH_08415 0.50 -0.9
Or see this region's nucleotide sequence