Strain Fitness in Erwinia amylovora T8 around OLJFJH_18125

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1
3,803,983	-				+0.0
3,804,043	-		OLJFJH_18120	0.24	-0.3
3,804,060	-		OLJFJH_18120	0.29	-1.3
3,804,190	-		OLJFJH_18120	0.68	-0.7
3,804,244	-		OLJFJH_18120	0.85	-1.7
3,804,314	-				+0.2
3,804,382	-				+0.0
3,804,387	-				-0.5
3,804,387	-				-1.9
3,804,409	-				-1.3
3,804,430	+		OLJFJH_18125	0.10	+0.2
3,804,430	+		OLJFJH_18125	0.10	-0.8
3,804,431	-		OLJFJH_18125	0.11	-1.6
3,804,443	+		OLJFJH_18125	0.12	-1.2
3,804,502	+		OLJFJH_18125	0.17	-1.8
3,804,503	-		OLJFJH_18125	0.17	-1.3
3,804,503	-		OLJFJH_18125	0.17	-1.2
3,804,514	+		OLJFJH_18125	0.18	-0.3
3,804,515	-		OLJFJH_18125	0.18	-0.3
3,804,529	+		OLJFJH_18125	0.19	-1.9
3,804,572	-		OLJFJH_18125	0.23	+0.5
3,804,659	+		OLJFJH_18125	0.31	-0.1
3,804,660	-		OLJFJH_18125	0.31	-0.9
3,804,764	+		OLJFJH_18125	0.40	-1.5
3,804,773	+		OLJFJH_18125	0.41	-0.7
3,804,774	-		OLJFJH_18125	0.41	-1.8
3,805,205	+		OLJFJH_18125	0.79	-2.0
3,805,260	+		OLJFJH_18125	0.84	-3.2
3,805,272	-		OLJFJH_18125	0.85	-0.8
3,805,272	-		OLJFJH_18125	0.85	-1.6
3,805,272	-		OLJFJH_18125	0.85	-1.2
3,805,340	-				-0.1
3,805,347	+				+1.1
3,805,355	+				-1.1
3,805,428	+				-0.5
3,805,428	+				-1.9
3,805,461	-				+0.5
3,805,461	-				+0.2
3,805,494	+				-3.4
3,805,495	-				+0.9
3,805,515	+				-0.9
3,805,515	+				-2.4
3,805,537	+				+0.2
3,805,540	+				+0.5
3,805,541	-				+0.2
3,805,541	-				-1.6
3,805,576	+				+0.8
3,805,583	+				+0.2
3,805,583	+				-0.2
3,805,611	+				+0.6
3,805,640	+				-0.3
3,805,666	+				+0.2
3,805,666	+				-0.7
3,805,673	+				+0.1
3,805,729	+				-0.1
3,805,729	+				-0.5
3,805,730	-				-0.2
3,805,834	-		OLJFJH_18130	0.17	-0.4
3,805,968	+		OLJFJH_18130	0.55	-0.6
3,805,969	-		OLJFJH_18130	0.55	-0.7
3,805,975	+		OLJFJH_18130	0.57	-1.8
3,805,976	-		OLJFJH_18130	0.57	+0.9
3,806,027	-		OLJFJH_18130	0.71	-0.9
3,806,101	-				+1.9
3,806,116	-				+0.7
3,806,384	-		OLJFJH_18135	0.28	+1.0
3,806,384	-		OLJFJH_18135	0.28	-0.1