Strain Fitness in Erwinia amylovora T8 around OLJFJH_16760

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOLJFJH_16755 and OLJFJH_16760 overlap by 1 nucleotidesOLJFJH_16760 and OLJFJH_16765 are separated by 88 nucleotides OLJFJH_16755: OLJFJH_16755 - 8-amino-7-oxononanoate synthase, at 3,538,238 to 3,539,392 _16755 OLJFJH_16760: OLJFJH_16760 - biotin synthase BioB, at 3,539,392 to 3,540,423 _16760 OLJFJH_16765: OLJFJH_16765 - adenosylmethionine--8-amino-7-oxononanoate transaminase, at 3,540,512 to 3,541,798 _16765 Position (kb) 3539 3540 3541Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3538.602 kb on + strand, within OLJFJH_16755at 3538.603 kb on - strand, within OLJFJH_16755at 3538.603 kb on - strand, within OLJFJH_16755at 3538.603 kb on - strand, within OLJFJH_16755at 3538.632 kb on + strand, within OLJFJH_16755at 3538.937 kb on - strand, within OLJFJH_16755at 3539.077 kb on + strand, within OLJFJH_16755at 3539.247 kb on + strand, within OLJFJH_16755at 3539.374 kb on + strandat 3539.409 kb on - strandat 3539.500 kb on - strand, within OLJFJH_16760at 3539.673 kb on + strand, within OLJFJH_16760at 3539.674 kb on - strand, within OLJFJH_16760at 3539.763 kb on + strand, within OLJFJH_16760at 3539.763 kb on + strand, within OLJFJH_16760at 3539.764 kb on - strand, within OLJFJH_16760at 3539.767 kb on - strand, within OLJFJH_16760at 3539.921 kb on + strand, within OLJFJH_16760at 3539.941 kb on - strand, within OLJFJH_16760at 3539.941 kb on - strand, within OLJFJH_16760at 3539.964 kb on + strand, within OLJFJH_16760at 3539.965 kb on - strand, within OLJFJH_16760at 3539.965 kb on - strand, within OLJFJH_16760at 3539.965 kb on - strand, within OLJFJH_16760at 3539.965 kb on - strand, within OLJFJH_16760at 3539.981 kb on + strand, within OLJFJH_16760at 3540.255 kb on - strand, within OLJFJH_16760at 3540.469 kb on - strandat 3540.474 kb on + strandat 3540.548 kb on - strandat 3540.548 kb on - strandat 3540.562 kb on + strandat 3540.887 kb on + strand, within OLJFJH_16765at 3540.888 kb on - strand, within OLJFJH_16765at 3540.953 kb on - strand, within OLJFJH_16765at 3541.423 kb on + strand, within OLJFJH_16765

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Per-strain Table

Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1
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3,538,602 + OLJFJH_16755 0.32 -0.4
3,538,603 - OLJFJH_16755 0.32 -0.0
3,538,603 - OLJFJH_16755 0.32 -0.6
3,538,603 - OLJFJH_16755 0.32 +0.3
3,538,632 + OLJFJH_16755 0.34 +0.0
3,538,937 - OLJFJH_16755 0.61 -0.7
3,539,077 + OLJFJH_16755 0.73 -0.1
3,539,247 + OLJFJH_16755 0.87 -1.4
3,539,374 + +0.1
3,539,409 - -0.2
3,539,500 - OLJFJH_16760 0.10 -0.4
3,539,673 + OLJFJH_16760 0.27 -1.4
3,539,674 - OLJFJH_16760 0.27 -2.0
3,539,763 + OLJFJH_16760 0.36 -1.7
3,539,763 + OLJFJH_16760 0.36 -2.7
3,539,764 - OLJFJH_16760 0.36 -1.3
3,539,767 - OLJFJH_16760 0.36 -2.4
3,539,921 + OLJFJH_16760 0.51 -1.1
3,539,941 - OLJFJH_16760 0.53 -2.6
3,539,941 - OLJFJH_16760 0.53 -2.4
3,539,964 + OLJFJH_16760 0.55 -3.5
3,539,965 - OLJFJH_16760 0.56 -2.1
3,539,965 - OLJFJH_16760 0.56 -2.1
3,539,965 - OLJFJH_16760 0.56 -1.2
3,539,965 - OLJFJH_16760 0.56 -2.0
3,539,981 + OLJFJH_16760 0.57 -3.8
3,540,255 - OLJFJH_16760 0.84 -2.1
3,540,469 - -0.1
3,540,474 + -1.9
3,540,548 - +1.3
3,540,548 - -0.8
3,540,562 + +0.2
3,540,887 + OLJFJH_16765 0.29 -0.1
3,540,888 - OLJFJH_16765 0.29 +0.3
3,540,953 - OLJFJH_16765 0.34 -0.6
3,541,423 + OLJFJH_16765 0.71 -0.4

Or see this region's nucleotide sequence